RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 JAK1P23458 1154 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 FASP25445 335 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 NMBRP28336 390 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 GABRB3P28472 473 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 IREB2P48200 963 aaKnown RBP10.37□□□□□ -0.75
LMX1A-201ENST00000294816 STX1BP61266 288 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 EN1Q05925 392 aaPredicted RBP10.37□□□□□ -0.75
LMX1A-201ENST00000294816 CTBP1Q13363 440 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 INPP5AQ14642 412 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 MOGQ16653 247 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 CNSTQ6PJW8 725 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 ABRAXAS1Q6UWZ7 409 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 SLC7A5P1Q8MH63 180 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 DHRSXQ8N5I4 330 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 OR6B3Q8NGW1 331 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 PHF21BQ96EK2 531 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 CPB2Q96IY4 423 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 IL22Q9GZX6 179 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 FANCEQ9HB96 536 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 UTP6Q9NYH9 597 aaKnown RBP10.37□□□□□ -0.75
LMX1A-201ENST00000294816 ST14Q9Y5Y6 855 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 TCRBV3S1A0A5B6 114 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 B4GAT1O43505 415 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 NRP2O60462 931 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 CAPNS1P04632 268 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 PSMA4P25789 261 aaKnown RBP10.37□□□□□ -0.75
LMX1A-201ENST00000294816 CLCN3P51790 818 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 SLC12A2P55011 1212 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 NFATC3Q12968 1075 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 CBLBQ13191 982 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 SPIDRQ14159 915 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 CAPRIN1Q14444 709 aaKnown RBP10.37□□□□□ -0.75
LMX1A-201ENST00000294816 SOWAHAQ2M3V2 549 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 OTUD3Q5T2D3 398 aaPredicted RBP10.37□□□□□ -0.75
LMX1A-201ENST00000294816 C6orf183Q5T699 404 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 ZNF618Q5T7W0 954 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 ZNF280DQ6N043 979 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 SNX29P2Q8IUI4 249 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 ANKRD52Q8NB46 1076 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 HPS1Q92902 700 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 ELMO2Q96JJ3 720 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 ADNPQ9H2P0 1102 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 FBRSL1Q9HCM7 1045 aaKnown RBP10.37□□□□□ -0.75
LMX1A-201ENST00000294816 CHST12Q9NRB3 414 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 RNF19AQ9NV58 838 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 TUBA8Q9NY65 449 aaPredicted RBP10.37□□□□□ -0.75
LMX1A-201ENST00000294816 NCKIPSDQ9NZQ3 722 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 SPATA7Q9P0W8 599 aa10.37□□□□□ -0.75
LMX1A-201ENST00000294816 GPC6Q9Y625 555 aaPredicted RBP10.37□□□□□ -0.75
LMX1A-201ENST00000294816 PTPRFP10586 1907 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 ZCWPW2A0A1B0GU75 182 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 DPYSL4O14531 572 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 INPP4BO15327 924 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 CNOT3O75175 753 aaKnown RBP10.36□□□□□ -0.75
LMX1A-201ENST00000294816 BAIAP3O94812 1187 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 SBK3P0C264 359 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 NCAM1P13591 858 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 MYF6P23409 242 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 YWHAQP27348 245 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 SULT1E1P49888 294 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 MPP1Q00013 466 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 GHRHRQ02643 423 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 SLC12A1Q13621 1099 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 LRP8Q14114 963 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 SQLEQ14534 574 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 STXBP2Q15833 593 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 C6orf10Q5SRN2 563 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 NANOGNBQ7Z5D8 188 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 AFAP1L2Q8N4X5 818 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 ANKFN1Q8N957 763 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 USP33Q8TEY7 942 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 ZC3H15Q8WU90 426 aaKnown RBP10.36□□□□□ -0.75
LMX1A-201ENST00000294816 EXT2Q93063 718 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 CCDC97Q96F63 343 aaPredicted RBP10.36□□□□□ -0.75
LMX1A-201ENST00000294816 BEGAINQ9BUH8 593 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 ING2Q9H160 280 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 GNPTGQ9UJJ9 305 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 HACD1B0YJ81 288 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 LSM1O15116 133 aaKnown RBP10.36□□□□□ -0.75
LMX1A-201ENST00000294816 TRIM24O15164 1050 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 HCRTO43612 131 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 OXSR1O95747 527 aaPredicted RBP10.36□□□□□ -0.75
LMX1A-201ENST00000294816 GNL1P36915 607 aaPredicted RBP10.36□□□□□ -0.75
LMX1A-201ENST00000294816 MAGEA12P43365 314 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 TPD52P55327 224 aaPredicted RBP10.36□□□□□ -0.75
LMX1A-201ENST00000294816 TRAP1Q12931 704 aaKnown RBP10.36□□□□□ -0.75
LMX1A-201ENST00000294816 ZBTB17Q13105 803 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 CSHL1Q14406 222 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 IER5Q5VY09 327 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 FAM160B1Q5W0V3 765 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 CLEC6AQ6EIG7 209 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 FAM35AQ86V20 835 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 EPHX4Q8IUS5 362 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 PSTKQ8IV42 348 aaKnown RBP10.36□□□□□ -0.75
LMX1A-201ENST00000294816 CHPT1Q8WUD6 406 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 KHSRPQ92945 711 aaKnown RBP eCLIP10.36□□□□□ -0.75
LMX1A-201ENST00000294816 ACDQ96AP0 544 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 LRCH3Q96II8 777 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 C9orf16Q9BUW7 83 aa10.36□□□□□ -0.75
LMX1A-201ENST00000294816 PIF1Q9H611 641 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms