RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CHI3L2Q15782 390 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 UGP2Q16851 508 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 N4BP2L1Q5TBK1 243 aaPredicted RBP9.26□□□□□ -0.93
PDPN-201ENST00000294489 FSTL4Q6MZW2 842 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 RANBP10Q6VN20 620 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 DENND1CQ8IV53 801 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 DCLK2Q8N568 766 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 KREMEN2Q8NCW0 462 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 MRGPRX2Q96LB1 330 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 SLC22A12Q96S37 553 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 TCF25Q9BQ70 676 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 MCMBPQ9BTE3 642 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 PRKD2Q9BZL6 878 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 SNX15Q9NRS6 342 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 GKN1Q9NS71 199 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 DCTN4Q9UJW0 460 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 CFAP73A6NFT4 308 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 KDELR3O43731 214 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 MPOP05164 745 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 SGSHP51688 502 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 SLC10A7Q0GE19 358 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 PCSK7Q16549 785 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 HTR3DQ70Z44 454 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 NLRP9Q7RTR0 991 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 CIR1Q86X95 450 aaPredicted RBP9.25□□□□□ -0.93
PDPN-201ENST00000294489 PGBD5Q8N414 524 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 OR52K2Q8NGK3 314 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 ARRDC2Q8TBH0 407 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 SLC22A17Q8WUG5 538 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 ISL2Q96A47 359 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 ERP27Q96DN0 273 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 ATXN7L3BQ96GX2 97 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 C7orf26Q96N11 449 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 ECT2Q9H8V3 914 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 TCAF1Q9Y4C2 921 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 A0A0G2JND7 137 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 HIDE1A8MVS5 230 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 NRG2O14511 850 aaPredicted RBP9.25□□□□□ -0.93
PDPN-201ENST00000294489 ATP5HO75947 161 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 FGF19O95750 216 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 C8AP07357 584 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 SKIV2L2P42285 1042 aaKnown RBP9.25□□□□□ -0.93
PDPN-201ENST00000294489 ARFIP2P53365 341 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 IRX4P78413 519 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 GNA12Q03113 381 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 BST1Q10588 318 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 IHHQ14623 411 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 CXorf57Q6NSI4 855 aaKnown RBP9.25□□□□□ -0.93
PDPN-201ENST00000294489 RFWD3Q6PCD5 774 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 KDELC2Q7Z4H8 507 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 CPXM2Q8N436 756 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 GABPB2Q8TAK5 448 aaPredicted RBP9.25□□□□□ -0.93
PDPN-201ENST00000294489 ZNF778Q96MU6 729 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 RANBP9Q96S59 729 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 TLR9Q9NR96 1032 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 TXLNGQ9NUQ3 528 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 CHKBQ9Y259 395 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 MTO1Q9Y2Z2 717 aaKnown RBP9.25□□□□□ -0.93
PDPN-201ENST00000294489 A0A1B0GVM2 712 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 CCDC78A2IDD5 438 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 TCAF2A6NFQ2 919 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 PLIN3O60664 434 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 SPATA31D3P0C874 917 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 CDC25CP30307 473 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 CTNNB1P35222 781 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 ACVRL1P37023 503 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 CD86P42081 329 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 STX3Q13277 289 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 THOC5Q13769 683 aaKnown RBP9.25□□□□□ -0.93
PDPN-201ENST00000294489 RFTN1Q14699 578 aaPredicted RBP9.25□□□□□ -0.93
PDPN-201ENST00000294489 CCDC153Q494R4 210 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 FASTKD1Q53R41 847 aaKnown RBP9.25□□□□□ -0.93
PDPN-201ENST00000294489 TMCO4Q5TGY1 634 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 PDE12Q6L8Q7 609 aaKnown RBP9.25□□□□□ -0.93
PDPN-201ENST00000294489 SPATA31D4Q6ZUB0 917 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 TMC7Q7Z402 723 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 HS6ST3Q8IZP7 471 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 BBS5Q8N3I7 341 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 POF1BQ8WVV4 589 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 VPS39Q96JC1 886 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 MYLK2Q9H1R3 596 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 ATXN3LQ9H3M9 355 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 ZNF510Q9Y2H8 683 aa9.25□□□□□ -0.93
PDPN-201ENST00000294489 CXorf51AA0A1B0GTR3 108 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 CCDC195A0A1B0GUA6 201 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 HEATR9A2RTY3 570 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 GOLGA8TH3BQL2 631 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 ARHGEF15O94989 841 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 VAPBO95292 243 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 TOP3BO95985 862 aaKnown RBP9.24□□□□□ -0.93
PDPN-201ENST00000294489 GLUD1P00367 558 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 LRG1P02750 347 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 DDX6P26196 483 aaKnown RBP eCLIP9.24□□□□□ -0.93
PDPN-201ENST00000294489 MAGEA12P43365 314 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 MAXP61244 160 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 SEPT6Q14141 434 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 LBRQ14739 615 aaKnown RBP9.24□□□□□ -0.93
PDPN-201ENST00000294489 PPM1JQ5JR12 505 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 FBXW10Q5XX13 1052 aa9.24□□□□□ -0.93
PDPN-201ENST00000294489 C16orf46Q6P387 395 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms