RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 KRT78Q8N1N4 520 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 NAT14Q8WUY8 206 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 NARS2Q96I59 477 aaKnown RBP15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 ACO2Q99798 780 aaKnown RBP15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 BTBD3Q9Y2F9 522 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 H7C4K7 107 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 MARSP56192 900 aaKnown RBP15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 JAM2P57087 298 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 SPIDRQ14159 915 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 PPP1R26Q5T8A7 1209 aaPredicted RBP15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 AAGABQ6PD74 315 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 PLEKHH3Q7Z736 793 aa15.47■□□□□ 0.07
SHROOM4-201ENST00000289292 UBA1P22314 1058 aaKnown RBP15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 NR4A1P22736 598 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 GALNT5Q7Z7M9 940 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 HERC6Q8IVU3 1022 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 MRPL45Q9BRJ2 306 aaKnown RBP15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 B3GNT5Q9BYG0 378 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 TTYH3Q9C0H2 523 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 ZFYVE28Q9HCC9 887 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 VAV3Q9UKW4 847 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 U3KQV3 271 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 GRIN2DO15399 1336 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 LRATO95237 230 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 LYNP07948 512 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 NOS2P35228 1153 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 ADCYAP1R1P41586 468 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 ARL4DP49703 201 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 SLC26A2P50443 739 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 CDH13P55290 713 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 RAP1GAP2Q684P5 730 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 DSELQ8IZU8 1212 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 SAMD3Q8N6K7 520 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 DGCR14Q96DF8 476 aaKnown RBP15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 SLC47A1Q96FL8 570 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 FANCEQ9HB96 536 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 TMPRSS4Q9NRS4 437 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 RPS6KB2Q9UBS0 482 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 CELF2O95319 508 aaKnown RBP15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 ZNF7P17097 686 aaPredicted RBP15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 PTPN1P18031 435 aaKnown RBP15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 MYL12AP19105 171 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 PEX2P28328 305 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 ABL2P42684 1182 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 TRPM5Q9NZQ8 1165 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 GNEQ9Y223 722 aaKnown RBP15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 ARHGAP23Q9P227 1491 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 YDJCA8MPS7 323 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 C9JVG2 144 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 NRG1Q02297 640 aaPredicted RBP15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 CRY1Q16526 586 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 BMT2Q1RMZ1 405 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 AKIRIN2Q53H80 203 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 TLCD1Q96CP7 247 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 PTCD3Q96EY7 689 aaKnown RBP15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 ARHGEF3Q9NR81 526 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 ARL15Q9NXU5 204 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 MAP10Q9P2G4 905 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 CPA4Q9UI42 421 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 DOLKQ9UPQ8 538 aa15.46■□□□□ 0.07
SHROOM4-201ENST00000289292 NRP2O60462 931 aa15.46■□□□□ 0.06
SHROOM4-201ENST00000289292 SIN3BO75182 1162 aa15.46■□□□□ 0.06
SHROOM4-201ENST00000289292 MT-ND1P03886 318 aa15.46■□□□□ 0.06
SHROOM4-201ENST00000289292 CCR3P51677 355 aa15.46■□□□□ 0.06
SHROOM4-201ENST00000289292 PRKCQQ04759 706 aa15.46■□□□□ 0.06
SHROOM4-201ENST00000289292 LPIN1Q14693 890 aa15.46■□□□□ 0.06
SHROOM4-201ENST00000289292 SLC44A1Q8WWI5 657 aa15.46■□□□□ 0.06
SHROOM4-201ENST00000289292 CADM1Q9BY67 442 aaKnown RBP15.46■□□□□ 0.06
SHROOM4-201ENST00000289292 EBF3Q9H4W6 596 aa15.46■□□□□ 0.06
SHROOM4-201ENST00000289292 TMEM134Q9H6X4 195 aa15.46■□□□□ 0.06
SHROOM4-201ENST00000289292 AJAP1Q9UKB5 411 aaPredicted RBP15.46■□□□□ 0.06
SHROOM4-201ENST00000289292 IKZF3Q9UKT9 509 aa15.46■□□□□ 0.06
SHROOM4-201ENST00000289292 CDH9Q9ULB4 789 aa15.46■□□□□ 0.06
SHROOM4-201ENST00000289292 ATRNO75882 1429 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 RGL2O15211 777 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 IL2P60568 153 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 PTPN20Q4JDL3 420 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 USP39Q53GS9 565 aaKnown RBP15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 MFSD5Q6N075 450 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 CYP4X1Q8N118 509 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 FAM45AQ8TCE6 357 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 PHF12Q96QT6 1004 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 OLFM1Q99784 485 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 PCDH12Q9NPG4 1184 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 PNMA8CA0A1B0GUJ8 204 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 FAM149AA5PLN7 773 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 KCNU1A8MYU2 1149 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 KLF10Q13118 480 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 MADCAM1Q13477 382 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 ZC3H7AQ8IWR0 971 aaKnown RBP15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 TRIM48Q8IWZ4 208 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 PDE9AO76083 593 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 FADS2O95864 444 aaKnown RBP15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 DARSP14868 501 aaKnown RBP15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 AQP4P55087 323 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 SFSWAPQ12872 951 aaKnown RBP15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 BLMHQ13867 455 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 DPP10Q8N608 796 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 CPT1BQ92523 772 aa15.45■□□□□ 0.06
SHROOM4-201ENST00000289292 HTRA1Q92743 480 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms