RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 PPARGP37231 505 aaPredicted RBP16.06■□□□□ 0.16
SMAD6-201ENST00000288840 RANBP1P43487 201 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 DSC2Q02487 901 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 PKN3Q6P5Z2 889 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 NAT14Q8WUY8 206 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 HIC2Q96JB3 615 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 NSMCE4AQ9NXX6 385 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 HACD3Q9P035 362 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 UXTQ9UBK9 157 aaPredicted RBP16.06■□□□□ 0.16
SMAD6-201ENST00000288840 RPL26L1Q9UNX3 145 aaKnown RBP16.06■□□□□ 0.16
SMAD6-201ENST00000288840 MCM3APO60318 1980 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 PSMD12O00232 456 aaPredicted RBP16.06■□□□□ 0.16
SMAD6-201ENST00000288840 TOMM70O94826 608 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 AXLP30530 894 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 STX5Q13190 355 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 ZRANB3Q5FWF4 1079 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 OR9I1Q8NGQ6 314 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 FAXDC2Q96IV6 333 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 SEPHS2Q99611 448 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 MIOSQ9NXC5 875 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 A0A1W2PQH9 124 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 F8W8V4 182 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 SLC1A2P43004 574 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 TBX4P57082 545 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 PQLC1Q8N2U9 271 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 ZNF786Q8N393 782 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 ADAMTS10Q9H324 1103 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 IGSF9Q9P2J2 1179 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 LRFN2Q9ULH4 789 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 SORCS3Q9UPU3 1222 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 DERAQ9Y315 318 aa16.06■□□□□ 0.16
SMAD6-201ENST00000288840 F8W810 466 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 GNGT2O14610 69 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 AURKAO14965 403 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 PSMD3O43242 534 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 CABYRO75952 493 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 GRIA3P42263 894 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 GLUD2P49448 558 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 ZNF276Q8N554 614 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 TRPC4APQ8TEL6 797 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 MLPHQ9BV36 600 aaPredicted RBP16.05■□□□□ 0.16
SMAD6-201ENST00000288840 TRIM8Q9BZR9 551 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 NDFIP2Q9NV92 336 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 SMPD4Q9NXE4 827 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 ADAMTS6Q9UKP5 1117 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 GPR182O15218 404 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 FMO4P31512 558 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 SLC5A3P53794 718 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 PSME3P61289 254 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 ZBTB49Q6ZSB9 765 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 FRA10AC1Q70Z53 315 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 MPP4Q96JB8 637 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 SEMA3CQ99985 751 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 TMEM79Q9BSE2 394 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 BPIFA1Q9NP55 256 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 KCTD3Q9Y597 815 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 ARHGEF37A1IGU5 675 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 FAM149AA5PLN7 773 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 DLX3O60479 287 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 FAM219BQ5XKK7 198 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 SATL1Q86VE3 508 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 CALML6Q8TD86 181 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 TBATAQ96M53 351 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 EGFL8Q99944 293 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 CDH9Q9ULB4 789 aa16.05■□□□□ 0.16
SMAD6-201ENST00000288840 CBX4O00257 560 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 GPR32O75388 356 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 KATNA1O75449 491 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 CHEK2O96017 543 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 PSMC3P17980 439 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 SERPINH1P50454 418 aaKnown RBP16.04■□□□□ 0.16
SMAD6-201ENST00000288840 MRPS6P82932 125 aaKnown RBP16.04■□□□□ 0.16
SMAD6-201ENST00000288840 CTXN3Q4LDR2 81 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 LRRC23Q53EV4 343 aaPredicted RBP16.04■□□□□ 0.16
SMAD6-201ENST00000288840 ARMCX6Q7L4S7 300 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 DNAJB14Q8TBM8 379 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 CIB1Q99828 191 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 CD274Q9NZQ7 290 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 AP4B1Q9Y6B7 739 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 COL1A2P08123 1366 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 RNASEH1O60930 286 aaKnown RBP16.04■□□□□ 0.16
SMAD6-201ENST00000288840 MAP2K5Q13163 448 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 MYO1HQ8N1T3 1032 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 TSPAN17Q96FV3 270 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 DCUN1D1Q96GG9 259 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 VAT1Q99536 393 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 PADI3Q9ULW8 664 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 RNF112Q9ULX5 631 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 KCNH4Q9UQ05 1017 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 C15orf38-AP3S2A0A0A6YYH1 394 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 NOL3O60936 208 aaKnown RBP16.04■□□□□ 0.16
SMAD6-201ENST00000288840 AOC1P19801 751 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 LRPAP1P30533 357 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 PBX3P40426 434 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 HADHAP40939 763 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 CCNFP41002 786 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 RENBPP51606 427 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 CAPRIN1Q14444 709 aaKnown RBP16.04■□□□□ 0.16
SMAD6-201ENST00000288840 INSCQ1MX18 579 aa16.04■□□□□ 0.16
SMAD6-201ENST00000288840 FAM171A1Q5VUB5 890 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms