RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 TTC24A2A3L6 582 aaPredicted RBP10.28□□□□□ -0.76
C9orf43-201ENST00000288462 MROH6A6NGR9 719 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 ZBBXA8MT70 800 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 GOLGA8TH3BQL2 631 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 GJB3O75712 270 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 VAPBO95292 243 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 EPOP01588 193 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 FGBP02675 491 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 FGF1P05230 155 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 TROVE2P10155 538 aaKnown RBP eCLIP10.28□□□□□ -0.76
C9orf43-201ENST00000288462 HLA-DPA1P20036 260 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 GABRB3P28472 473 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 MAGEA9P43362 315 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 ABCG1P45844 678 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 CNGA3Q16281 694 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 GALNTL6Q49A17 601 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 PPM1JQ5JR12 505 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 CES4AQ5XG92 561 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 IL31Q6EBC2 164 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 KDELC2Q7Z4H8 507 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 BBS5Q8N3I7 341 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 ARL14EPQ8N8R7 260 aaPredicted RBP10.28□□□□□ -0.76
C9orf43-201ENST00000288462 KLHL23Q8NBE8 558 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 C2CD4AQ8NCU7 369 aaPredicted RBP10.28□□□□□ -0.76
C9orf43-201ENST00000288462 E2F7Q96AV8 911 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 ATXN7L3BQ96GX2 97 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 TRIB3Q96RU7 358 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 TMEM106CQ9BVX2 250 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 TRPC7Q9HCX4 862 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 SMPD4Q9NXE4 827 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 INSL6Q9Y581 213 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 ANKRD36A6QL64 1941 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.28□□□□□ -0.76
C9orf43-201ENST00000288462 SNNO75324 88 aaPredicted RBP10.28□□□□□ -0.76
C9orf43-201ENST00000288462 UBOX5O94941 541 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 ADH1AP07327 375 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 SPATA31D3P0C874 917 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 CR2P20023 1033 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 GLDCP23378 1020 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 SLC1A2P43004 574 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 SCTRP47872 440 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 LIG3P49916 1009 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 ZXDBP98169 803 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 OCRLQ01968 901 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 BST1Q10588 318 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 GRM3Q14832 879 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 PCLAFQ15004 111 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 CHI3L2Q15782 390 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 ATG16L1Q676U5 607 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 MBLAC2Q68D91 279 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 KIAA0408Q6ZU52 694 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 SPATA31D4Q6ZUB0 917 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 GAREM2Q75VX8 874 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 NLRP9Q7RTR0 991 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 NUDCD3Q8IVD9 361 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 FITM2Q8N6M3 262 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 HJURPQ8NCD3 748 aaPredicted RBP10.28□□□□□ -0.76
C9orf43-201ENST00000288462 ACVR1CQ8NER5 493 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 OR13J1Q8NGT2 312 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 CINPQ9BW66 212 aaPredicted RBP10.28□□□□□ -0.76
C9orf43-201ENST00000288462 NPHS2Q9NP85 383 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 ACTL7AQ9Y615 435 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 IRAK3Q9Y616 596 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 CPQQ9Y646 472 aa10.28□□□□□ -0.76
C9orf43-201ENST00000288462 A0A096LPK6 155 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 TSPAN3O60637 253 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 AHSGP02765 367 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 SERPINF2P08697 491 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 NEFHP12036 1026 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 HDCP19113 662 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 GABRR2P28476 465 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 RGRP47804 291 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 POLD2P49005 469 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 LBX1P52954 281 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 SLC7A9P82251 487 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 MPP1Q00013 466 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 ACVR1Q04771 509 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 FPGSQ05932 587 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 CDK18Q07002 472 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 CCDC153Q494R4 210 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 TXNDC8Q6A555 127 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 C16orf46Q6P387 395 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 CCDC149Q6ZUS6 474 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 GALNT7Q86SF2 657 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 LCA5Q86VQ0 697 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 DENND6AQ8IWF6 608 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 PEX13Q92968 403 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 IFT43Q96FT9 208 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 THOC1Q96FV9 657 aaKnown RBP10.27□□□□□ -0.77
C9orf43-201ENST00000288462 CYP2S1Q96SQ9 504 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 SPON2Q9BUD6 331 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 TRIM55Q9BYV6 548 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 CAB39LQ9H9S4 337 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 TMEM216Q9P0N5 145 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 CXXC1Q9P0U4 656 aaPredicted RBP10.27□□□□□ -0.77
C9orf43-201ENST00000288462 LZTS1Q9Y250 596 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 ANKRD6Q9Y2G4 727 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 MKI67P46013 3256 aaKnown RBP10.27□□□□□ -0.77
C9orf43-201ENST00000288462 CCDC195A0A1B0GUA6 201 aa10.27□□□□□ -0.77
C9orf43-201ENST00000288462 SLC7A4O43246 635 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms