RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 C19orf18Q8NEA5 215 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 BTN2A2Q8WVV5 523 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 RCN3Q96D15 328 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 AGAP2Q99490 1192 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 DTLQ9NZJ0 730 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 XPR1Q9UBH6 696 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 MRASO14807 208 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 ZBTB24O43167 697 aaPredicted RBP12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 CNOT3O75175 753 aaKnown RBP12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 TRMUO75648 421 aaKnown RBP12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 FBXO21O94952 628 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 ZNF682O95780 498 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 SERPINA6P08185 405 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 GRM5P41594 1212 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 NLGN2Q8NFZ4 835 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 PLEKHA8Q96JA3 519 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 ARMC7Q9H6L4 198 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 ARHGEF4Q9NR80 690 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 MPP6Q9NZW5 540 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 MYO18AQ92614 2054 aaKnown RBP12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 CCL22O00626 93 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 PEX11AO75192 247 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 IMPDH2P12268 514 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 GABRB2P47870 512 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 RPL14P50914 215 aaKnown RBP12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 MRPS5P82675 430 aaKnown RBP12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 VAC14Q08AM6 782 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 ZNF252P-AS1Q0IIN9 211 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 KLHL17Q6TDP4 642 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 SPATA22Q8NHS9 363 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 UBE2OQ9C0C9 1292 aaKnown RBP12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 SESN1Q9Y6P5 492 aa12.68□□□□□ -0.38
SLC6A1-201ENST00000287766 SLC12A8A0AV02 714 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 F8W8V4 182 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 MPOP05164 745 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 S100A1P23297 94 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 MFSD14CQ5VZR4 134 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 OR7A2PQ8NGA2 310 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 GPR152Q8TDT2 470 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 PRR11Q96HE9 360 aaPredicted RBP12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 NSMCE2Q96MF7 247 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 BDH2Q9BUT1 245 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 PRRC2BQ5JSZ5 2229 aaKnown RBP12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 MAP3K13O43283 966 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 PSEN2P49810 448 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 ATP6AP1LQ52LC2 224 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 MARC1Q5VT66 337 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 NEPROQ6NW34 567 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 NT5DC4Q86YG4 428 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 MAGED4Q96JG8 741 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 TRIM62Q9BVG3 475 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 MUC3BQ9H195 1237 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 RIC8BQ9NVN3 520 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 MSI1O43347 362 aaKnown RBP12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 TBX10O75333 385 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 SEC24AO95486 1093 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 UQCRBP14927 111 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 BRCC3P46736 316 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 TRAF3Q13114 568 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 ZNF460Q14592 562 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 ZNF567Q8N184 647 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 UTP15Q8TED0 518 aaKnown RBP12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 FBXO32Q969P5 355 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 ZNF570Q96NI8 536 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 WDR41Q9HAD4 459 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 DSEQ9UL01 958 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 NENFQ9UMX5 172 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 TRIM17Q9Y577 477 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 NCAM2O15394 837 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 ITM2AO43736 263 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 C22orf31O95567 290 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 PGK1P00558 417 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 PIGRP01833 764 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 EDN1P05305 212 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 CRHR1P34998 444 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 ADRA1BP35368 520 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 CDH13P55290 713 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 ZNF280AP59817 542 aaPredicted RBP12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 FASTKQ14296 549 aaKnown RBP12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 CDHR3Q6ZTQ4 885 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 BBS7Q8IWZ6 715 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 APBB2Q92870 758 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 SMARCD1Q96GM5 515 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 TBL1YQ9BQ87 522 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 TRIM54Q9BYV2 358 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 ALG9Q9H6U8 611 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 PREBQ9HCU5 417 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 PRDM5Q9NQX1 630 aaPredicted RBP12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 DIABLOQ9NR28 239 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 PKP3Q9Y446 797 aa12.67□□□□□ -0.38
SLC6A1-201ENST00000287766 PLCH1Q4KWH8 1693 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 BCLAF3A2AJT9 711 aaKnown RBP12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 CENPXA8MT69 81 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 TK2O00142 265 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 TREHO43280 583 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 SIN3BO75182 1162 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 CCDC166P0CW27 439 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 TSHRP16473 764 aa12.66□□□□□ -0.38
SLC6A1-201ENST00000287766 VCLP18206 1134 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms