RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 GLOD4Q9HC38 313 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 ATAD3AQ9NVI7 634 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 RCOR3Q9P2K3 495 aaPredicted RBP18.69■□□□□ 0.58
PCDH1-201ENST00000287008 PCDHA11Q9Y5I1 949 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 NQO1P15559 274 aaKnown RBP18.69■□□□□ 0.58
PCDH1-201ENST00000287008 LBPP18428 481 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 PTPN4P29074 926 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 ZBTB49Q6ZSB9 765 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 FGFBP2Q9BYJ0 223 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 SLC40A1Q9NP59 571 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 PHPT1Q9NRX4 125 aaPredicted RBP18.69■□□□□ 0.58
PCDH1-201ENST00000287008 ALADP13716 330 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 COX7A2P14406 83 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 TSHRP16473 764 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 FRG1Q14331 258 aaKnown RBP18.69■□□□□ 0.58
PCDH1-201ENST00000287008 GALNT3Q14435 633 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 PARP15Q460N3 678 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 C12orf50Q8NA57 414 aaPredicted RBP18.69■□□□□ 0.58
PCDH1-201ENST00000287008 ARNTL2Q8WYA1 636 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 ZNF75CPQ92670 426 aaPredicted RBP18.69■□□□□ 0.58
PCDH1-201ENST00000287008 COL26A1Q96A83 441 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 XPNPEP1Q9NQW7 623 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 TMCO1Q9UM00 188 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 STXBP5LQ9Y2K9 1186 aa18.69■□□□□ 0.58
PCDH1-201ENST00000287008 ATRNL1Q5VV63 1379 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 PTPN2P17706 415 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 NOS3P29474 1203 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 SPDYCQ5MJ68 293 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 SLC41A1Q8IVJ1 513 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 MCRS1Q96EZ8 462 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 SEPHS2Q99611 448 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 FAIM2Q9BWQ8 316 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 KLRG2A4D1S0 409 aaPredicted RBP18.68■□□□□ 0.58
PCDH1-201ENST00000287008 URADA6NGE7 173 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 INPP4BO15327 924 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 IFNA16P05015 189 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 UGT2B4P06133 528 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 RPA3P35244 121 aaPredicted RBP18.68■□□□□ 0.58
PCDH1-201ENST00000287008 RPL14P50914 215 aaKnown RBP18.68■□□□□ 0.58
PCDH1-201ENST00000287008 CCR4P51679 360 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 USP39Q53GS9 565 aaKnown RBP18.68■□□□□ 0.58
PCDH1-201ENST00000287008 SH3D19Q5HYK7 790 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 CNSTQ6PJW8 725 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 ATXN2LQ8WWM7 1075 aaKnown RBP18.68■□□□□ 0.58
PCDH1-201ENST00000287008 MYO19Q96H55 970 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 CHKBQ9Y259 395 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 DCXO43602 365 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 ULK1O75385 1050 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 UBOX5O94941 541 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 CCL14Q16627 93 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 TBCELQ5QJ74 424 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 RHOQP17081 205 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 NAA20P61599 178 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 TMPRSS6Q8IU80 811 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 OR4L1Q8NH43 312 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 HEXDCQ8WVB3 486 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 SCLYQ96I15 445 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 SNX27Q96L92 541 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 RIPOR3Q96MK2 946 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 TMPRSS4Q9NRS4 437 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 ADPRHL2Q9NX46 363 aa18.68■□□□□ 0.58
PCDH1-201ENST00000287008 MLYCDO95822 493 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 FASP25445 335 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 TRMT5Q32P41 509 aaKnown RBP18.67■□□□□ 0.58
PCDH1-201ENST00000287008 DLK2Q6UY11 383 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 EFCAB3Q8N7B9 438 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 PAWRQ96IZ0 340 aaKnown RBP18.67■□□□□ 0.58
PCDH1-201ENST00000287008 NDNQ99608 321 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 HNRNPABQ99729 332 aaKnown RBP18.67■□□□□ 0.58
PCDH1-201ENST00000287008 TCF25Q9BQ70 676 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 MRPS17Q9Y2R5 130 aaKnown RBP18.67■□□□□ 0.58
PCDH1-201ENST00000287008 A0A1W2PQ67 120 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 GCATO75600 419 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 C22orf31O95567 290 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 C8AP07357 584 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 TACR2P21452 398 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 DRG2P55039 364 aaKnown RBP18.67■□□□□ 0.58
PCDH1-201ENST00000287008 ATP6V0D1P61421 351 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 PLEKHA7Q6IQ23 1121 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 KLHL35Q6PF15 583 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 PIWIL4Q7Z3Z4 852 aaKnown RBP18.67■□□□□ 0.58
PCDH1-201ENST00000287008 KRT73Q86Y46 540 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 FNIP1Q8TF40 1166 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 CSPG4P5Q96PW8 444 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 DCLRE1BQ9H816 532 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 RXFP1Q9HBX9 757 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 HS6ST1O60243 411 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 EPHX1P07099 455 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 ABRQ12979 859 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 TEX44Q53QW1 395 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 PSRC1Q6PGN9 363 aaPredicted RBP18.67■□□□□ 0.58
PCDH1-201ENST00000287008 LIMD1Q9UGP4 676 aa18.67■□□□□ 0.58
PCDH1-201ENST00000287008 FKBP6O75344 327 aa18.66■□□□□ 0.58
PCDH1-201ENST00000287008 ACADSP16219 412 aa18.66■□□□□ 0.58
PCDH1-201ENST00000287008 NEK2P51955 445 aa18.66■□□□□ 0.58
PCDH1-201ENST00000287008 FAM151BQ6UXP7 276 aa18.66■□□□□ 0.58
PCDH1-201ENST00000287008 PAGE2Q7Z2X7 111 aa18.66■□□□□ 0.58
PCDH1-201ENST00000287008 VN1R5Q7Z5H4 357 aa18.66■□□□□ 0.58
PCDH1-201ENST00000287008 DPP10Q8N608 796 aa18.66■□□□□ 0.58
PCDH1-201ENST00000287008 KREMEN2Q8NCW0 462 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms