RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SARS2Q9NP81 518 aaKnown RBP13.53□□□□□ -0.24
SCAF4-201ENST00000286835 MKS1Q9NXB0 559 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 CACNG4Q9UBN1 327 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 LGALS2P05162 132 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 SNRPB2P08579 225 aaKnown RBP13.53□□□□□ -0.24
SCAF4-201ENST00000286835 NR4A1P22736 598 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 PCSK6P29122 969 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 CD151P48509 253 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 TAF6P49848 677 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 SLC5A3P53794 718 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 TUBB3Q13509 450 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 HNRNPDQ14103 355 aaKnown RBP13.53□□□□□ -0.24
SCAF4-201ENST00000286835 FAM117BQ6P1L5 589 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 ZDHHC17Q8IUH5 632 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 AHI1Q8N157 1196 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 WNT8BQ93098 351 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 GLT1D1Q96MS3 346 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 IL22Q9GZX6 179 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 TKTL2Q9H0I9 626 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 NXF3Q9H4D5 531 aaKnown RBP13.53□□□□□ -0.24
SCAF4-201ENST00000286835 NIPAL4Q0D2K0 466 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 TRIM25Q14258 630 aaKnown RBP13.53□□□□□ -0.24
SCAF4-201ENST00000286835 ESRP1Q6NXG1 681 aaKnown RBP13.53□□□□□ -0.24
SCAF4-201ENST00000286835 SCIMPQ6UWF3 145 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 SLC26A9Q7LBE3 791 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 MARVELD2Q8N4S9 558 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 GRIN3AQ8TCU5 1115 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 GFM2Q969S9 779 aaKnown RBP13.53□□□□□ -0.24
SCAF4-201ENST00000286835 ZNF512Q96ME7 567 aaPredicted RBP13.53□□□□□ -0.24
SCAF4-201ENST00000286835 OSBPL11Q9BXB4 747 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 PNPLA3Q9NST1 481 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 OR12D3Q9UGF7 316 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 MYO9BQ13459 2157 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 DLX3O60479 287 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 ITGBL1O95965 494 aaPredicted RBP13.53□□□□□ -0.24
SCAF4-201ENST00000286835 PGK1P00558 417 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 YAP1P46937 504 aaKnown RBP13.53□□□□□ -0.24
SCAF4-201ENST00000286835 ENTPD1P49961 510 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 RAB10P61026 200 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 GRIK4Q16099 956 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 PPP1R3AQ16821 1122 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 AGAP9Q5VTM2 703 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 ANKRD23Q86SG2 305 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 METTL25Q8N6Q8 603 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 SLC35F5Q8WV83 523 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 CANT1Q8WVQ1 401 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 ARNTL2Q8WYA1 636 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 KLHL32Q96NJ5 620 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 CLK4Q9HAZ1 481 aaKnown RBP13.53□□□□□ -0.24
SCAF4-201ENST00000286835 PLAC1Q9HBJ0 212 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 SUN2Q9UH99 717 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 TLL2Q9Y6L7 1015 aa13.53□□□□□ -0.24
SCAF4-201ENST00000286835 RRN3P2A6NIE6 340 aa13.52□□□□□ -0.24
SCAF4-201ENST00000286835 H3BNX3 289 aa13.52□□□□□ -0.24
SCAF4-201ENST00000286835 H6PDO95479 791 aa13.52□□□□□ -0.24
SCAF4-201ENST00000286835 AP2A1O95782 977 aa13.52□□□□□ -0.24
SCAF4-201ENST00000286835 PRDX6P30041 224 aa13.52□□□□□ -0.24
SCAF4-201ENST00000286835 SLC25A52Q3SY17 297 aa13.52□□□□□ -0.24
SCAF4-201ENST00000286835 ZNF484Q5JVG2 852 aa13.52□□□□□ -0.24
SCAF4-201ENST00000286835 SAMD4BQ5PRF9 694 aaKnown RBP13.52□□□□□ -0.24
SCAF4-201ENST00000286835 ZYG11AQ6WRX3 759 aa13.52□□□□□ -0.24
SCAF4-201ENST00000286835 CHST15Q7LFX5 561 aaPredicted RBP13.52□□□□□ -0.24
SCAF4-201ENST00000286835 LILRA2Q8N149 483 aa13.52□□□□□ -0.24
SCAF4-201ENST00000286835 EMID1Q96A84 441 aaPredicted RBP13.52□□□□□ -0.24
SCAF4-201ENST00000286835 HAPLN3Q96S86 360 aa13.52□□□□□ -0.24
SCAF4-201ENST00000286835 RBM22Q9NW64 420 aaKnown RBP eCLIP13.52□□□□□ -0.241e-6■■■■■ 34.8
SCAF4-201ENST00000286835 ZDHHC7Q9NXF8 308 aa13.52□□□□□ -0.24
SCAF4-201ENST00000286835 CROCCQ5TZA2 2017 aa13.52□□□□□ -0.24
SCAF4-201ENST00000286835 A0A087WXM4 84 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 FASP25445 335 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 ICAM3P32942 547 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 NOS2P35228 1153 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 SLC26A2P50443 739 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 CDK18Q07002 472 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 MGAT5BQ3V5L5 792 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 HFE2Q6ZVN8 426 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 TMEM110Q86TL2 294 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 KLHL23Q8NBE8 558 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 OR52K2Q8NGK3 314 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 MTG1Q9BT17 334 aaPredicted RBP13.52□□□□□ -0.25
SCAF4-201ENST00000286835 EIF2AQ9BY44 585 aaKnown RBP13.52□□□□□ -0.25
SCAF4-201ENST00000286835 RHOJQ9H4E5 214 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 IPO11Q9UI26 975 aaKnown RBP13.52□□□□□ -0.25
SCAF4-201ENST00000286835 COL5A3P25940 1745 aaPredicted RBP13.52□□□□□ -0.25
SCAF4-201ENST00000286835 NRAPQ86VF7 1730 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 ERI2A8K979 691 aaKnown RBP13.52□□□□□ -0.25
SCAF4-201ENST00000286835 VILLO15195 856 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 YWHAQP27348 245 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 PTPN9P43378 593 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 NPY2RP49146 381 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 CSE1LP55060 971 aaKnown RBP13.52□□□□□ -0.25
SCAF4-201ENST00000286835 TAS2R39P59534 338 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 LDLRAP1Q5SW96 308 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 CXCL17Q6UXB2 119 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 PLEKHG4BQ96PX9 1271 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 NSMCE4AQ9NXX6 385 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 GIMAP2Q9UG22 337 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 UBQLN1Q9UMX0 589 aaKnown RBP13.52□□□□□ -0.25
SCAF4-201ENST00000286835 PHF24Q9UPV7 400 aa13.52□□□□□ -0.25
SCAF4-201ENST00000286835 BTRCQ9Y297 605 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms