RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 CERS2Q96G23 380 aa11.12□□□□□ -0.63
GGPS1-201ENST00000282841 PSD3Q9NYI0 1048 aa11.12□□□□□ -0.63
GGPS1-201ENST00000282841 AAR2Q9Y312 384 aaKnown RBP11.12□□□□□ -0.63
GGPS1-201ENST00000282841 USP34Q70CQ2 3546 aa11.12□□□□□ -0.63
GGPS1-201ENST00000282841 TRAV19A0A0A6YYK7 116 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 A0A1B0GVM2 712 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 TCAF2A6NFQ2 919 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 FAM159BA6NKW6 160 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 A8MX80 341 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 AURKAO14965 403 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 LPXNO60711 386 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 DNAJC6O75061 913 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 CLDN11O75508 207 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 ANXA9O76027 345 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 MLNP12872 115 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 FOXN2P32314 431 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 CD70P32970 193 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 HTR7P34969 479 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 CTSOP43234 321 aaPredicted RBP11.11□□□□□ -0.63
GGPS1-201ENST00000282841 IL10RBQ08334 325 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 C16orf46Q6P387 395 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 KDELC1Q6UW63 502 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 MFN1Q8IWA4 741 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 NAT14Q8WUY8 206 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 FRMD8Q9BZ67 464 aaPredicted RBP11.11□□□□□ -0.63
GGPS1-201ENST00000282841 SLC25A51Q9H1U9 297 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 NKX2-4Q9H2Z4 354 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 PDFQ9HBH1 243 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 ZNF358Q9NW07 568 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 GGT7Q9UJ14 662 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 OBSL1O75147 1896 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 GBF1Q92538 1859 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 GMNCA6NCL1 334 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 FAM47DPA6NHR8 397 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 CD160O95971 181 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 SLC8A1P32418 973 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 ADRA1AP35348 466 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 MAPKAPK2P49137 400 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 STK19P49842 368 aaPredicted RBP11.11□□□□□ -0.63
GGPS1-201ENST00000282841 SIRPB2Q5JXA9 342 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 TRIM68Q6AZZ1 485 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 LVRNQ6Q4G3 990 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 RANBP10Q6VN20 620 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 STRA8Q7Z7C7 330 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 TDRPQ86YL5 185 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.11□□□□□ -0.63
GGPS1-201ENST00000282841 USP13Q92995 863 aaPredicted RBP11.11□□□□□ -0.63
GGPS1-201ENST00000282841 LRRC39Q96DD0 335 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 ZFYVE19Q96K21 471 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 FAM111AQ96PZ2 611 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 GCNAQ96QF7 691 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 FEM1AQ9BSK4 669 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 MECRQ9BV79 373 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 PBX4Q9BYU1 374 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 EPN3Q9H201 632 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 TNKS2Q9H2K2 1166 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 SLCO1B3Q9NPD5 702 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 ACSS2Q9NR19 701 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 NKIRAS1Q9NYS0 192 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 UBA2Q9UBT2 640 aaPredicted RBP11.11□□□□□ -0.63
GGPS1-201ENST00000282841 WNT6Q9Y6F9 365 aa11.11□□□□□ -0.63
GGPS1-201ENST00000282841 INSIG1O15503 277 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 PRSS56P0CW18 603 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 CEBPBP17676 345 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 ATP5DP30049 168 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 VIPR2P41587 438 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 GEMP55040 296 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 MPP1Q00013 466 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 COL13A1Q5TAT6 717 aaPredicted RBP11.1□□□□□ -0.63
GGPS1-201ENST00000282841 TMCO4Q5TGY1 634 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 EMC10Q5UCC4 262 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 CROCCP2Q86T23 111 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 SPATA6LQ8N4H0 392 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 PHOSPHO2Q8TCD6 241 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 FAM136AQ96C01 138 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 LRRC3BQ96PB8 259 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 CINPQ9BW66 212 aaPredicted RBP11.1□□□□□ -0.63
GGPS1-201ENST00000282841 FGFR1OP2Q9NVK5 253 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 ARL5AQ9Y689 179 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 NEDD8-MDP1E9PL57 170 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 TYROBPO43914 113 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 CACNG3O60359 315 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 OLFM2O95897 454 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 MNAT1P51948 309 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 DNAJC3Q13217 504 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 ZNF460Q14592 562 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 CYTH1Q15438 398 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 PACS1Q6VY07 963 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 Q6ZNB5 142 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 CPLX4Q7Z7G2 160 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 TMEM135Q86UB9 458 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 KCNMB4Q86W47 210 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 TTC8Q8TAM2 541 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 HTATIP2Q9BUP3 242 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 PHACTR1Q9C0D0 580 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 CNOT10Q9H9A5 744 aaKnown RBP11.1□□□□□ -0.63
GGPS1-201ENST00000282841 PIDD1Q9HB75 910 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 SSX2IPQ9Y2D8 614 aa11.1□□□□□ -0.63
GGPS1-201ENST00000282841 MTF2Q9Y483 593 aaPredicted RBP11.1□□□□□ -0.63
GGPS1-201ENST00000282841 IRAK3Q9Y616 596 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms