RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 ENGASEQ8NFI3 743 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 GOLGA1Q92805 767 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 PTCHD1Q96NR3 888 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 IPO9Q96P70 1041 aaKnown RBP10.06□□□□□ -0.8
LRTM1-201ENST00000273286 CDC6Q99741 560 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 GPR174Q9BXC1 333 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 MMRN2Q9H8L6 949 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 LRRC4Q9HBW1 653 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 ABCC13Q9NSE7 274 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 RMND1Q9NWS8 449 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 KIAA1522Q9P206 1035 aaPredicted RBP10.06□□□□□ -0.8
LRTM1-201ENST00000273286 STOML2Q9UJZ1 356 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 KLK13Q9UKR3 277 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 KIAA1257Q9ULG3 409 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 PCDHGB2Q9Y5G2 931 aa10.06□□□□□ -0.8
LRTM1-201ENST00000273286 ZZEF1O43149 2961 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 ADAMTS9Q9P2N4 1935 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 CKAP5Q14008 2032 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 SLC12A8A0AV02 714 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 SLC16A3O15427 465 aaKnown RBP10.05□□□□□ -0.8
LRTM1-201ENST00000273286 IRAK2O43187 625 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 SH3BP5O60239 455 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 TOP3BO95985 862 aaKnown RBP10.05□□□□□ -0.8
LRTM1-201ENST00000273286 ATP5BP06576 529 aaKnown RBP10.05□□□□□ -0.8
LRTM1-201ENST00000273286 SETSIPP0DME0 302 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 TBXAS1P24557 533 aaPredicted RBP10.05□□□□□ -0.8
LRTM1-201ENST00000273286 MAPKAPK2P49137 400 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 NDUFA8P51970 172 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 COPAP53621 1224 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 RAD23BP54727 409 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 DCAF12L1Q5VU92 463 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 PROSER1Q86XN7 944 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 AHI1Q8N157 1196 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 CHCHD4Q8N4Q1 142 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 OR2T3Q8NH03 318 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 TSG101Q99816 390 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 FSCN3Q9NQT6 498 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 CNGB3Q9NQW8 809 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 WHRNQ9P202 907 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 COQ4Q9Y3A0 265 aa10.05□□□□□ -0.8
LRTM1-201ENST00000273286 TYW5A2RUC4 315 aaKnown RBP10.04□□□□□ -0.8
LRTM1-201ENST00000273286 DFNA5O60443 496 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 BUB1BO60566 1050 aaPredicted RBP10.04□□□□□ -0.8
LRTM1-201ENST00000273286 HMBSP08397 361 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 DBHP09172 617 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 FTH1P19P0C7X4 201 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 HOXD9P28356 352 aaPredicted RBP10.04□□□□□ -0.8
LRTM1-201ENST00000273286 FKBP3Q00688 224 aaKnown RBP10.04□□□□□ -0.8
LRTM1-201ENST00000273286 PKP1Q13835 747 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 STILQ15468 1287 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 VMACQ2NL98 169 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 TTC31Q49AM3 519 aaPredicted RBP10.04□□□□□ -0.8
LRTM1-201ENST00000273286 COBLL1Q53SF7 1204 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 NUGGCQ68CJ6 796 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 BICRALQ6AI39 1079 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 UNC45BQ8IWX7 931 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 SIX6OS1Q8N1H7 587 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 ZCCHC9Q8N567 271 aaKnown RBP10.04□□□□□ -0.8
LRTM1-201ENST00000273286 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.04□□□□□ -0.8
LRTM1-201ENST00000273286 KCTD13Q8WZ19 329 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 TMA16Q96EY4 203 aaKnown RBP10.04□□□□□ -0.8
LRTM1-201ENST00000273286 ULBP1Q9BZM6 244 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 LHX5Q9H2C1 402 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 TMEM245Q9H330 911 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 GAREM1Q9H706 876 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 TM7SF3Q9NS93 570 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 TSPAN16Q9UKR8 245 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 SCML1Q9UN30 329 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 PCDHB10Q9UN67 800 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 WDFY3Q8IZQ1 3526 aa10.04□□□□□ -0.8
LRTM1-201ENST00000273286 ACACAQ13085 2346 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 KCNJ18B7U540 433 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 CBFA2T3O75081 653 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 ZNF202O95125 648 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 DNTTP04053 509 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 DLDP09622 509 aaKnown RBP10.03□□□□□ -0.8
LRTM1-201ENST00000273286 VDRP11473 427 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 TACR1P25103 407 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 SLC11A2P49281 568 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 FAM193AP78312 1265 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 LRRC63Q05C16 580 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 CUL2Q13617 745 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 GOLGA7BQ2TAP0 167 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 INAVAQ3KP66 663 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 FNDC3BQ53EP0 1204 aaKnown RBP10.03□□□□□ -0.8
LRTM1-201ENST00000273286 BSPRYQ5W0U4 402 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 LRSAM1Q6UWE0 723 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 DBX2Q6ZNG2 339 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 FMNL3Q8IVF7 1028 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 CCDC117Q8IWD4 279 aaPredicted RBP10.03□□□□□ -0.8
LRTM1-201ENST00000273286 GALNT15Q8N3T1 639 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 OR2I1PQ8NGU4 316 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 IRGQQ8WZA9 623 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 SEMA4DQ92854 862 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 GSDMAQ96QA5 445 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 DDX50Q9BQ39 737 aaKnown RBP10.03□□□□□ -0.8
LRTM1-201ENST00000273286 BTBD1Q9H0C5 482 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 KLHL25Q9H0H3 589 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 SGK2Q9HBY8 427 aa10.03□□□□□ -0.8
LRTM1-201ENST00000273286 CD93Q9NPY3 652 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms