RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 HMBOX1Q6NT76 420 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 SPPL2BQ8TCT7 592 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 MED10Q9BTT4 135 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 ULBP1Q9BZM6 244 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 RNF39Q9H2S5 420 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 OLAHQ9NV23 265 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 NCKIPSDQ9NZQ3 722 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 H3BRB1 525 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 PIRO00625 290 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 TAS2R39P59534 338 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 SULT2A1Q06520 285 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 PAQR9Q6ZVX9 377 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 PELI3Q8N2H9 469 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 HSPBAP1Q96EW2 488 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 MAELQ96JY0 434 aaKnown RBP27.78■■■□□ 2.04
CBX4-201ENST00000269397 HAUS8Q9BT25 410 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 TUT1Q9H6E5 874 aaKnown RBP27.78■■■□□ 2.04
CBX4-201ENST00000269397 DDIT4Q9NX09 232 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 DERAQ9Y315 318 aa27.78■■■□□ 2.04
CBX4-201ENST00000269397 ERI2A8K979 691 aaKnown RBP27.77■■■□□ 2.04
CBX4-201ENST00000269397 AURKAO14965 403 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 NPR3P17342 541 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 HADHAP40939 763 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 PRKAA2P54646 552 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 ITPRIPL1Q6GPH6 555 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 ARHGAP36Q6ZRI8 547 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 ARMCX2Q7L311 632 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 CARM1Q86X55 608 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 SNRNP27Q8WVK2 155 aaKnown RBP27.77■■■□□ 2.04
CBX4-201ENST00000269397 TEKT5Q96M29 485 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 OSMRQ99650 979 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 C16orf70Q9BSU1 422 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 UNC93B1Q9H1C4 597 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 SUCOQ9UBS9 1254 aaKnown RBP27.77■■■□□ 2.04
CBX4-201ENST00000269397 CNOT11Q9UKZ1 510 aaKnown RBP27.77■■■□□ 2.04
CBX4-201ENST00000269397 TRPC5OSA6NMA1 111 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 ZNF839A8K0R7 811 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 C8BP07358 591 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 NCAM1P13591 858 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 TXNL4AP83876 142 aaKnown RBP27.77■■■□□ 2.04
CBX4-201ENST00000269397 LRP8Q14114 963 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 GRIK4Q16099 956 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 CLEC20AQ6ZU45 233 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 IPMKQ8NFU5 416 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 EDEM1Q92611 657 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 KIFC1Q9BW19 673 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 MRPL46Q9H2W6 279 aaKnown RBP27.77■■■□□ 2.04
CBX4-201ENST00000269397 CACNG4Q9UBN1 327 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 ZSWIM8A7E2V4 1837 aa27.77■■■□□ 2.04
CBX4-201ENST00000269397 SMIM28A0A1B0GU29 152 aa27.76■■■□□ 2.04
CBX4-201ENST00000269397 HEATR9A2RTY3 570 aa27.76■■■□□ 2.04
CBX4-201ENST00000269397 HSPA1AP0DMV8 641 aaKnown RBP27.76■■■□□ 2.04
CBX4-201ENST00000269397 HSPA1BP0DMV9 641 aaKnown RBP27.76■■■□□ 2.04
CBX4-201ENST00000269397 TSPAN8P19075 237 aa27.76■■■□□ 2.04
CBX4-201ENST00000269397 SEMA3BQ13214 749 aa27.76■■■□□ 2.04
CBX4-201ENST00000269397 CSHL1Q14406 222 aa27.76■■■□□ 2.04
CBX4-201ENST00000269397 IL31Q6EBC2 164 aa27.76■■■□□ 2.04
CBX4-201ENST00000269397 OSBPL11Q9BXB4 747 aa27.76■■■□□ 2.04
CBX4-201ENST00000269397 ATXN3LQ9H3M9 355 aa27.76■■■□□ 2.04
CBX4-201ENST00000269397 THEGQ9P2T0 379 aa27.76■■■□□ 2.04
CBX4-201ENST00000269397 PADI4Q9UM07 663 aa27.76■■■□□ 2.04
CBX4-201ENST00000269397 MYRFQ9Y2G1 1151 aa27.76■■■□□ 2.04
CBX4-201ENST00000269397 ATP6AP2A0A1C7CYW4 349 aa27.76■■■□□ 2.03
CBX4-201ENST00000269397 H3BNH8 94 aa27.76■■■□□ 2.03
CBX4-201ENST00000269397 PSMD12O00232 456 aaPredicted RBP27.76■■■□□ 2.03
CBX4-201ENST00000269397 HUS1O60921 280 aa27.76■■■□□ 2.03
CBX4-201ENST00000269397 ATP6AP2O75787 350 aa27.76■■■□□ 2.03
CBX4-201ENST00000269397 SLC25A27O95847 323 aa27.76■■■□□ 2.03
CBX4-201ENST00000269397 YBX3P16989 372 aaKnown RBP eCLIP27.76■■■□□ 2.03
CBX4-201ENST00000269397 STT3AP46977 705 aa27.76■■■□□ 2.03
CBX4-201ENST00000269397 NAPEPLDQ6IQ20 393 aa27.76■■■□□ 2.03
CBX4-201ENST00000269397 HDAC11Q96DB2 347 aa27.76■■■□□ 2.03
CBX4-201ENST00000269397 SLC2A13Q96QE2 648 aa27.76■■■□□ 2.03
CBX4-201ENST00000269397 DNAI2Q9GZS0 605 aa27.76■■■□□ 2.03
CBX4-201ENST00000269397 UBQLN1Q9UMX0 589 aaKnown RBP27.76■■■□□ 2.03
CBX4-201ENST00000269397 SLC1A2P43004 574 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 RIN3Q8TB24 985 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 DIS3LQ8TF46 1054 aaKnown RBP27.75■■■□□ 2.03
CBX4-201ENST00000269397 ITFG2Q969R8 447 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 RMND5BQ96G75 393 aaPredicted RBP27.75■■■□□ 2.03
CBX4-201ENST00000269397 TNIP3Q96KP6 325 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 CAMKK2Q96RR4 588 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 TRHDEQ9UKU6 1024 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 CNOT6Q9ULM6 557 aaKnown RBP27.75■■■□□ 2.03
CBX4-201ENST00000269397 CSADQ9Y600 493 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 SBF1O95248 1867 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 TRIM24O15164 1050 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 CYP2C9P11712 490 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 ARNTP27540 789 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 ADCYAP1R1P41586 468 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 MAMDC4Q6UXC1 1216 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 GPRIN1Q7Z2K8 1008 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 FAM47BQ8NA70 645 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 PHF21BQ96EK2 531 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 UTP6Q9NYH9 597 aaKnown RBP27.75■■■□□ 2.03
CBX4-201ENST00000269397 SFMBT1Q9UHJ3 866 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 UBDO15205 165 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 USP17L7P0C7H9 530 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 STX5Q13190 355 aa27.75■■■□□ 2.03
CBX4-201ENST00000269397 LPIN1Q14693 890 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms