RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 OR4L1Q8NH43 312 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 TRIB2Q92519 343 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 AGRPO00253 132 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 UBOX5O94941 541 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 NFATC1O95644 943 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 ABCB1P08183 1280 aaPredicted RBP13.84□□□□□ -0.19
NPC1-201ENST00000269228 CALB2P22676 271 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 PSMA4P25789 261 aaKnown RBP13.84□□□□□ -0.19
NPC1-201ENST00000269228 ZC3H12BQ5HYM0 836 aaKnown RBP13.84□□□□□ -0.19
NPC1-201ENST00000269228 CPA6Q8N4T0 437 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 PTGR2Q8N8N7 351 aaPredicted RBP13.84□□□□□ -0.19
NPC1-201ENST00000269228 AHCYL2Q96HN2 611 aaKnown RBP13.84□□□□□ -0.19
NPC1-201ENST00000269228 FAXDC2Q96IV6 333 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 ARHGAP39Q9C0H5 1083 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 CLUHO75153 1309 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 L1CAMP32004 1257 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 MC4RP32245 332 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 ATXN1P54253 815 aaKnown RBP13.84□□□□□ -0.19
NPC1-201ENST00000269228 YBEYP58557 167 aaPredicted RBP13.84□□□□□ -0.19
NPC1-201ENST00000269228 IRF8Q02556 426 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 CYP2A13Q16696 494 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 CDCA2Q69YH5 1023 aaPredicted RBP13.84□□□□□ -0.19
NPC1-201ENST00000269228 GRAMD4Q6IC98 578 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 IL27RAQ6UWB1 636 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 CTU1Q7Z7A3 348 aaKnown RBP13.84□□□□□ -0.19
NPC1-201ENST00000269228 RASGEF1CQ8N431 466 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 MAGEC3Q8TD91 643 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 KCTD4Q8WVF5 259 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 MTFMTQ96DP5 389 aaKnown RBP13.84□□□□□ -0.19
NPC1-201ENST00000269228 FUBP3Q96I24 572 aaKnown RBP eCLIP13.84□□□□□ -0.19
NPC1-201ENST00000269228 ACSS3Q9H6R3 686 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 VPS45Q9NRW7 570 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 CACNA2D2Q9NY47 1150 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 TRPC4Q9UBN4 977 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 NDOR1Q9UHB4 597 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 TCRBV9S1A1TA0A576 114 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 DNTTP04053 509 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 APODP05090 189 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 ALADP13716 330 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 GPD2P43304 727 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 PIK3CGP48736 1102 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 TRIM60Q495X7 471 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 PPP2R2DQ66LE6 453 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 TAPT1Q6NXT6 567 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 CHST9Q7L1S5 443 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 CENPLQ8N0S6 344 aaPredicted RBP13.84□□□□□ -0.19
NPC1-201ENST00000269228 SNX8Q9Y5X2 465 aa13.84□□□□□ -0.19
NPC1-201ENST00000269228 SETD1AO15047 1707 aaKnown RBP13.83□□□□□ -0.19
NPC1-201ENST00000269228 ALOX15BO15296 676 aa13.83□□□□□ -0.19
NPC1-201ENST00000269228 CD3EAPO15446 510 aaKnown RBP13.83□□□□□ -0.19
NPC1-201ENST00000269228 STBD1O95210 358 aa13.83□□□□□ -0.19
NPC1-201ENST00000269228 SLC25A14O95258 325 aaPredicted RBP13.83□□□□□ -0.19
NPC1-201ENST00000269228 ITGA2BP08514 1039 aa13.83□□□□□ -0.19
NPC1-201ENST00000269228 OCM2P0CE71 109 aa13.83□□□□□ -0.19
NPC1-201ENST00000269228 OCMP0CE72 109 aaPredicted RBP13.83□□□□□ -0.19
NPC1-201ENST00000269228 CYP4F8P98187 520 aa13.83□□□□□ -0.19
NPC1-201ENST00000269228 GNA12Q03113 381 aa13.83□□□□□ -0.19
NPC1-201ENST00000269228 CNKSR3Q6P9H4 555 aa13.83□□□□□ -0.19
NPC1-201ENST00000269228 SCUBE1Q8IWY4 988 aa13.83□□□□□ -0.19
NPC1-201ENST00000269228 SPATA6LQ8N4H0 392 aa13.83□□□□□ -0.19
NPC1-201ENST00000269228 FBXL18Q96ME1 805 aa13.83□□□□□ -0.19
NPC1-201ENST00000269228 PCYT2Q99447 389 aa13.83□□□□□ -0.19
NPC1-201ENST00000269228 COPS8Q99627 209 aa13.83□□□□□ -0.19
NPC1-201ENST00000269228 YIPF3Q9GZM5 350 aa13.83□□□□□ -0.19
NPC1-201ENST00000269228 HBS1LQ9Y450 684 aaKnown RBP13.83□□□□□ -0.19
NPC1-201ENST00000269228 TNPO3Q9Y5L0 923 aaKnown RBP13.83□□□□□ -0.19
NPC1-201ENST00000269228 A0A1B0GVM2 712 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 TCAF2A6NFQ2 919 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 FCHO1O14526 889 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 ATG7O95352 703 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 ABHD2P08910 425 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 PLOD1Q02809 727 aaPredicted RBP13.83□□□□□ -0.2
NPC1-201ENST00000269228 MAD2L1Q13257 205 aaPredicted RBP13.83□□□□□ -0.2
NPC1-201ENST00000269228 CLEC20AQ6ZU45 233 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 C2orf15Q8WU43 125 aaKnown RBP13.83□□□□□ -0.2
NPC1-201ENST00000269228 ATXN2LQ8WWM7 1075 aaKnown RBP13.83□□□□□ -0.2
NPC1-201ENST00000269228 FAM120BQ96EK7 910 aaKnown RBP13.83□□□□□ -0.2
NPC1-201ENST00000269228 TWNKQ96RR1 684 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 KLQ9UEF7 1012 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 PTPRJQ12913 1337 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 TSHRP16473 764 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 TRIP4Q15650 581 aaPredicted RBP13.83□□□□□ -0.2
NPC1-201ENST00000269228 RHBDF2Q6PJF5 856 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 CNSTQ6PJW8 725 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 LRRC57Q8N9N7 239 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 ABHD8Q96I13 439 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 SLC40A1Q9NP59 571 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 SUFUQ9UMX1 484 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 TBC1D3DA0A087WVF3 549 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 TBC1D3IA0A087WXS9 549 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 TBC1D3EA0A087X179 549 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 TBC1D3KA0A087X1G2 549 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 TBC1D3FA6NER0 549 aaPredicted RBP13.83□□□□□ -0.2
NPC1-201ENST00000269228 TBC1D3LB9A6J9 549 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 TBC1D3HP0C7X1 549 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 UNGP13051 313 aaPredicted RBP13.83□□□□□ -0.2
NPC1-201ENST00000269228 CHRNB3Q05901 458 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 MSLNQ13421 630 aaPredicted RBP13.83□□□□□ -0.2
NPC1-201ENST00000269228 TBC1D3GQ6DHY5 549 aa13.83□□□□□ -0.2
NPC1-201ENST00000269228 TBC1D3CQ6IPX1 549 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms