RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 TOP1MTQ969P6 601 aa14.62□□□□□ -0.07
PDLIM2-201ENST00000265810 CCDC126Q96EE4 140 aa14.62□□□□□ -0.07
PDLIM2-201ENST00000265810 BRD9Q9H8M2 597 aa14.62□□□□□ -0.07
PDLIM2-201ENST00000265810 MSH3P20585 1137 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 SLC10A7Q0GE19 358 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 KLF1Q13351 362 aaPredicted RBP14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 DBN1Q16643 649 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 SPDYAQ5MJ70 313 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 CHST9Q7L1S5 443 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 TAS1R1Q7RTX1 841 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 SLC41A1Q8IVJ1 513 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 IGSF9Q9P2J2 1179 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 DNAJC16Q9Y2G8 782 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 FAM155BO75949 473 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 EN2P19622 333 aaPredicted RBP14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 SULT2A1Q06520 285 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 ZCCHC23Q6ZST2 131 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 COCHO43405 550 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 UGT2B4P06133 528 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 ACVRL1P37023 503 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 GJA8P48165 433 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 NRIP1P48552 1158 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 PLK1P53350 603 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 BOP1Q14137 746 aaKnown RBP14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 LRRC26Q2I0M4 334 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 ZMIZ2Q8NF64 920 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 SMG9Q9H0W8 520 aaKnown RBP14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 NMRAL1Q9HBL8 299 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 J3KR12 359 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 NFATC1O95644 943 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 NDST3O95803 873 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 PAFAH1B3Q15102 231 aaKnown RBP14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 PACS1Q6VY07 963 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 ADCK2Q7Z695 626 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 RAB42Q8N4Z0 105 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 CXorf38Q8TB03 319 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 SNX19Q92543 992 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 KCNN1Q92952 543 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 ABCB8Q9NUT2 735 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 NCKIPSDQ9NZQ3 722 aa14.61□□□□□ -0.07
PDLIM2-201ENST00000265810 SEMA5AQ13591 1074 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 ARCQ7LC44 396 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 NAT8LQ8N9F0 302 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 FOXO6A8MYZ6 492 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 TMEM189-UBE2V1I3L0A0 370 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 ESRRBO95718 433 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 FGFR3P22607 806 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 GRK2P25098 689 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 CHRNA4P43681 627 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 SFSWAPQ12872 951 aaKnown RBP14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 SH2D4BQ5SQS7 431 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 ZNF598Q86UK7 904 aaKnown RBP14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 RMDN2Q96LZ7 410 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 SERPINI1Q99574 410 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 LOC100653049A0A140TA62 436 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 CCL22O00626 93 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 INSIG1O15503 277 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 KRT34O76011 436 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 TPBGLP0DKB5 382 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 PTPRNQ16849 979 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 CCDC153Q494R4 210 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 XKR4Q5GH76 650 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 RASIP1Q5U651 963 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 TRABD2AQ86V40 505 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 ST13P5Q8NFI4 369 aaPredicted RBP14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 OR4K2Q8NGD2 314 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 MYO19Q96H55 970 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 CDYLQ9Y232 598 aa14.6□□□□□ -0.07
PDLIM2-201ENST00000265810 TTC24A2A3L6 582 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 TRIM13O60858 407 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 CSKP41240 450 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 PFKPQ01813 784 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 SGCGQ13326 291 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 TEAD2Q15562 447 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 SETMARQ53H47 684 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 CMC1Q7Z7K0 106 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 KIRREL3Q8IZU9 778 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 HERPUD2Q9BSE4 406 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 EPS15L1Q9UBC2 864 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 HEY2Q9UBP5 337 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 SYCE1LA8MT33 242 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 TXNDC9O14530 226 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 GUCA1CO95843 209 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 CNPP09543 421 aaKnown RBP14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 BMPR1AP36894 532 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 ALFQ53S48 1182 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 OR4L1Q8NH43 312 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 ACTL7BQ9Y614 415 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 ZNF840PA6NDX5 716 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 CCT8L1PA6NM43 557 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 HLA-DQB2P05538 268 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 AQP5P55064 265 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 SKOR1P84550 965 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 CUL3Q13618 768 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 ATXN7L2Q5T6C5 722 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 SLC44A1Q8WWI5 657 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 ZNF75CPQ92670 426 aaPredicted RBP14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 PPP1R16AQ96I34 528 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 TDP1Q9NUW8 608 aa14.59□□□□□ -0.07
PDLIM2-201ENST00000265810 MYO7AQ13402 2215 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms