RNA–Protein interactions for RNA: ENST00000264158.12

RAB3GAP1-201, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-201ENST00000264158 NEUROD4Q9HD90 331 aa9.45□□□□□ -0.9
RAB3GAP1-201ENST00000264158 MRGBPQ9NV56 204 aa9.45□□□□□ -0.9
RAB3GAP1-201ENST00000264158 GRHL1Q9NZI5 618 aa9.45□□□□□ -0.9
RAB3GAP1-201ENST00000264158 UBP1Q9NZI7 540 aa9.45□□□□□ -0.9
RAB3GAP1-201ENST00000264158 CORO1CQ9ULV4 474 aaPredicted RBP9.45□□□□□ -0.9
RAB3GAP1-201ENST00000264158 hCG_1818297A0A087WSY0 165 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 M0R2N6 131 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 NRP1O14786 923 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 NUDT14O95848 222 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 PRNPP04156 253 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 PAEPP09466 180 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 HNF1BP35680 557 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 NCKAP1LP55160 1127 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 BOP1Q14137 746 aaKnown RBP9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 PLEKHG6Q3KR16 790 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 LRRC38Q5VT99 294 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 CST9Q5W186 159 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 PHYKPLQ8IUZ5 450 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 CDCA3Q99618 268 aaPredicted RBP9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 MMADHCQ9H3L0 296 aaPredicted RBP9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 SIX2Q9NPC8 291 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 SLC17A7Q9P2U7 560 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 CPQQ9Y646 472 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 C9J4A7 227 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 CNPP09543 421 aaKnown RBP9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 AMPD1P23109 780 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 CXCL12P48061 93 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 NME5P56597 212 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 SLC1A5Q15758 541 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 VARS2Q5ST30 1063 aaKnown RBP9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 SCUBE3Q8IX30 993 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 MPP4Q96JB8 637 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 TMEM109Q9BVC6 243 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 GID8Q9NWU2 228 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 FAM170BA6NMN3 283 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 GRXCR1A8MXD5 290 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 ISM1B1AKI9 464 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 B4GALT4O60513 344 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 GCATO75600 419 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 MT-CO1P00395 513 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 CCDC130P13994 396 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 ALAS2P22557 587 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 GPC1P35052 558 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 GP5P40197 560 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 CENPAP49450 140 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 PURAQ00577 322 aaKnown RBP9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 C15orf59Q2T9L4 293 aaPredicted RBP9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 ZACNQ401N2 412 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 VSTM1Q6UX27 236 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 PHF13Q86YI8 300 aaPredicted RBP9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 RASGRP3Q8IV61 690 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 LRMDAQ9H2I8 198 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 BCAS3Q9H6U6 928 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 NRDE2Q9H7Z3 1164 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 DDX18Q9NVP1 670 aaKnown RBP9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 NMRK1Q9NWW6 199 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 SIRPGQ9P1W8 387 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 TRMT6Q9UJA5 497 aaKnown RBP9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 PCDHA11Q9Y5I1 949 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 ZNF839A8K0R7 811 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 KHNYNO15037 678 aaKnown RBP9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 PLA2G6O60733 806 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 UGCGQ16739 394 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 COL13A1Q5TAT6 717 aaPredicted RBP9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 MRNIPQ6NTE8 343 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 POLNQ7Z5Q5 900 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 RABEPKQ7Z6M1 372 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 PIGWQ7Z7B1 504 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 LINC00523Q86TU6 105 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 DIS3LQ8TF46 1054 aaKnown RBP9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 ATP13A3Q9H7F0 1226 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 ARL8BQ9NVJ2 186 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 WWOXQ9NZC7 414 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 SEPT3Q9UH03 358 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 ACOT9Q9Y305 439 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 SPEF2Q9C093 1822 aa9.44□□□□□ -0.9
RAB3GAP1-201ENST00000264158 SIGLEC16A6NMB1 481 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 E5RJQ4 531 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 TRIM13O60858 407 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 JCHAINP01591 159 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 ELFN1P0C7U0 828 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 ALDH4A1P30038 563 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 PCYT1AP49585 367 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 LRRC74AQ0VAA2 488 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 RIPOR1Q6ZS17 1223 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 GPR141Q7Z602 305 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 ALYREFQ86V81 257 aaKnown RBP9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 SNX32Q86XE0 403 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 MCEMP1Q8IX19 187 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 OR5B17Q8NGF7 314 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 PHOSPHO2Q8TCD6 241 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 RHBDD1Q8TEB9 315 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 HTR3CQ8WXA8 447 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 KCNS3Q9BQ31 491 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 KIF17Q9P2E2 1029 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 STXBP5LQ9Y2K9 1186 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 ABCC6O95255 1503 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 A0A096LPK6 155 aa9.43□□□□□ -0.9
RAB3GAP1-201ENST00000264158 CYP7B1O75881 506 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms