RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ERLEC1Q96DZ1 483 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 ZFYVE19Q96K21 471 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 CACNA2D2Q9NY47 1150 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 GMIPQ9P107 970 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 AJAP1Q9UKB5 411 aaPredicted RBP14.12□□□□□ -0.15
CDH3-201ENST00000264012 AP4S1Q9Y587 144 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 PCDHB9Q9Y5E1 797 aa14.12□□□□□ -0.15
CDH3-201ENST00000264012 CLPTM1O96005 669 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 LDLRP01130 860 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 TRPC1P48995 793 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 CYP4Z1Q86W10 505 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 CFAP52Q8N1V2 620 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 OR52K2Q8NGK3 314 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 ZSCAN18Q8TBC5 510 aaPredicted RBP14.11□□□□□ -0.15
CDH3-201ENST00000264012 REPS1Q96D71 796 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 TMEM79Q9BSE2 394 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 PHACTR1Q9C0D0 580 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 TMPRSS4Q9NRS4 437 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 VPS45Q9NRW7 570 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 SLC17A7Q9P2U7 560 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 LIMD1Q9UGP4 676 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 EFCAB14O75071 495 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 WDR47O94967 919 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 VNN1O95497 513 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 RPN2P04844 631 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 SLC16A1P53985 500 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 LRRC74BQ6ZQY2 392 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 SPPL2AQ8TCT8 520 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 SLC44A1Q8WWI5 657 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 SELENOMQ8WWX9 145 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 ELMO1Q92556 727 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 MARK4Q96L34 752 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 MECRQ9BV79 373 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 RAP2CQ9Y3L5 183 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 PHLPP1O60346 1717 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 MOXD2PA6NHM9 499 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 PMM2O15305 246 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 GRK4P32298 578 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 GPR15P49685 360 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 SLC25A3Q00325 362 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 PPP1R15BQ5SWA1 713 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 METTL3Q86U44 580 aaKnown RBP14.11□□□□□ -0.15
CDH3-201ENST00000264012 RNF145Q96MT1 663 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 CCDC3Q9BQI4 270 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 NR2E1Q9Y466 385 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 RPTORQ8N122 1335 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 C2CD4BA6NLJ0 364 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 SEPT4O43236 478 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 PEX11AO75192 247 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 RASSF9O75901 435 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 SMNDC1O75940 238 aaKnown RBP eCLIP14.11□□□□□ -0.15
CDH3-201ENST00000264012 PPP2R1BP30154 601 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 NUP107P57740 925 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 MFSD5Q6N075 450 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 C12orf50Q8NA57 414 aaPredicted RBP14.11□□□□□ -0.15
CDH3-201ENST00000264012 OR4L1Q8NH43 312 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 RDH11Q8TC12 318 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 PCED1BQ96HM7 432 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 PPP1R16AQ96I34 528 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 TSEN34Q9BSV6 310 aaKnown RBP14.11□□□□□ -0.15
CDH3-201ENST00000264012 RHOJQ9H4E5 214 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 CYLDQ9NQC7 956 aa14.11□□□□□ -0.15
CDH3-201ENST00000264012 EDF1O60869 148 aaKnown RBP14.1□□□□□ -0.15
CDH3-201ENST00000264012 UNGP13051 313 aaPredicted RBP14.1□□□□□ -0.15
CDH3-201ENST00000264012 CES1P23141 567 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 GABRR2P28476 465 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 TAF5Q15542 800 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 LIPMQ5VYY2 423 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 SYT12Q8IV01 421 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 IRGQQ8WZA9 623 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 TADA1Q96BN2 335 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 ACBD6Q9BR61 282 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 TBC1D10AQ9BXI6 508 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 ARHGEF4Q9NR80 690 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 LRCH1Q9Y2L9 728 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 VWA7Q9Y334 891 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 ATXN2Q99700 1313 aaKnown RBP14.1□□□□□ -0.15
CDH3-201ENST00000264012 ARL5CA6NH57 179 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 CTPS1P17812 591 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 TSPAN8P19075 237 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 ASTE1Q2TB18 679 aaPredicted RBP14.1□□□□□ -0.15
CDH3-201ENST00000264012 SH3D19Q5HYK7 790 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 DET1Q7L5Y6 550 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 SIAH1Q8IUQ4 282 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 C10orf107Q8IVU9 208 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 MAGED4Q96JG8 741 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 QKIQ96PU8 341 aaKnown RBP eCLIP14.1□□□□□ -0.15
CDH3-201ENST00000264012 BBS2Q9BXC9 721 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 CAB39LQ9H9S4 337 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 MAN1C1Q9NR34 630 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 PAPOLBQ9NRJ5 636 aaKnown RBP14.1□□□□□ -0.15
CDH3-201ENST00000264012 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.1□□□□□ -0.15
CDH3-201ENST00000264012 CD3EAPO15446 510 aaKnown RBP14.1□□□□□ -0.15
CDH3-201ENST00000264012 MLYCDO95822 493 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 GLUD2P49448 558 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 POM121L1PQ3SYA9 428 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 OTOP3Q7RTS5 596 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 TMEM132CQ8N3T6 1108 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 CCDC185Q8N715 623 aa14.1□□□□□ -0.15
CDH3-201ENST00000264012 AGO3Q9H9G7 860 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms