RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 TMEM159Q96B96 161 aa12.98□□□□□ -0.33
TTC39A-202ENST00000262676 CLIP3Q96DZ5 547 aa12.98□□□□□ -0.33
TTC39A-202ENST00000262676 SHOC2Q9UQ13 582 aa12.98□□□□□ -0.33
TTC39A-202ENST00000262676 RAB27AP51159 221 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 APLP1P51693 650 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 SPIDRQ14159 915 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 CXXC5Q7LFL8 322 aaKnown RBP12.97□□□□□ -0.33
TTC39A-202ENST00000262676 SLC47A2Q86VL8 602 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 TRNT1Q96Q11 434 aaKnown RBP12.97□□□□□ -0.33
TTC39A-202ENST00000262676 NCK1P16333 377 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 PPP2R2BQ00005 443 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 CBX3Q13185 183 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 ACOX1Q15067 660 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 TFAP2DQ7Z6R9 452 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 RIOX2Q8IUF8 465 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 MYOCQ99972 504 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 NMRAL1Q9HBL8 299 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 MAT2BQ9NZL9 334 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 NDRG2Q9UN36 371 aaKnown RBP12.97□□□□□ -0.33
TTC39A-202ENST00000262676 FAM205AQ6ZU69 1335 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 TIPRLO75663 272 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 C9P02748 559 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 GLI1P08151 1106 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 COPZ1P61923 177 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 ABRAXAS1Q6UWZ7 409 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 ARHGAP36Q6ZRI8 547 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 NYAP1Q6ZVC0 841 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 HAVCR1Q96D42 359 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 CYP11B1P15538 503 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 HOXA10P31260 410 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-202ENST00000262676 SRSF11Q05519 484 aaKnown RBP12.97□□□□□ -0.33
TTC39A-202ENST00000262676 CBWD6Q4V339 395 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 TTC23Q5W5X9 447 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 ZNF554Q86TJ5 538 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 BRSK2Q8IWQ3 736 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 KBTBD8Q8NFY9 601 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 REPS1Q96D71 796 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 CPNE1Q99829 537 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 RBM22Q9NW64 420 aaKnown RBP eCLIP12.97□□□□□ -0.33
TTC39A-202ENST00000262676 VPS4BO75351 444 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 CYP4B1P13584 511 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 CRABP2P29373 138 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 IFI35P80217 286 aaPredicted RBP12.97□□□□□ -0.33
TTC39A-202ENST00000262676 SLAIN1Q8ND83 568 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 ACTRT1Q8TDG2 376 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 ZNF354BQ96LW1 612 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 CBWD1Q9BRT8 395 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 TLR8Q9NR97 1041 aaKnown RBP12.97□□□□□ -0.33
TTC39A-202ENST00000262676 AGPAT3Q9NRZ7 376 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 ERGIC3Q9Y282 383 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 DHRS7Q9Y394 339 aa12.97□□□□□ -0.33
TTC39A-202ENST00000262676 A0A096LPK6 155 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 SLC26A2P50443 739 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 FRG1Q14331 258 aaKnown RBP12.96□□□□□ -0.33
TTC39A-202ENST00000262676 MED22Q15528 200 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 C16orf46Q6P387 395 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 RSL24D1Q9UHA3 163 aaKnown RBP12.96□□□□□ -0.33
TTC39A-202ENST00000262676 SNX6Q9UNH7 406 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 GIT1Q9Y2X7 761 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 LOC110117498-PIK3R3F6TDL0 507 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 VDRP11473 427 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 GLT6D1Q7Z4J2 308 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 MCOLN3Q8TDD5 553 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 MMADHCQ9H3L0 296 aaPredicted RBP12.96□□□□□ -0.33
TTC39A-202ENST00000262676 SSR3Q9UNL2 185 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 BAIAP2Q9UQB8 552 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 ANKRD6Q9Y2G4 727 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 SERPINA3P01011 423 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 NELFEP18615 380 aaKnown RBP12.96□□□□□ -0.33
TTC39A-202ENST00000262676 PTPN3P26045 913 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 SSTR1P30872 391 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 GMFBP60983 142 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 SNRPFP62306 86 aaKnown RBP12.96□□□□□ -0.33
TTC39A-202ENST00000262676 CRHR2Q13324 411 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 FAM81AQ8TBF8 368 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 SLC38A2Q96QD8 506 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 GORASP1Q9BQQ3 440 aa12.96□□□□□ -0.33
TTC39A-202ENST00000262676 REREQ9P2R6 1566 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 MOXD2PA6NHM9 499 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 TGFB3P10600 412 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 PGAM1P18669 254 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 SLC25A3Q00325 362 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 SPANXN3Q5MJ09 141 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 FBXO47Q5MNV8 452 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 GALNTL5Q7Z4T8 443 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 SUN5Q8TC36 379 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 ATXN2LQ8WWM7 1075 aaKnown RBP12.96□□□□□ -0.34
TTC39A-202ENST00000262676 RXFP2Q8WXD0 754 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 TOR3AQ9H497 397 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 PCDH12Q9NPG4 1184 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 AASDHPPTQ9NRN7 309 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 SLC27A5Q9Y2P5 690 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 CRYL1Q9Y2S2 319 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 SNCAIPQ9Y6H5 919 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 KPNA3O00505 521 aaPredicted RBP12.96□□□□□ -0.34
TTC39A-202ENST00000262676 ZNF470Q6ECI4 717 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 CAMK1DQ8IU85 385 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 FBXW8Q8N3Y1 598 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 KLRG1Q96E93 195 aa12.96□□□□□ -0.34
TTC39A-202ENST00000262676 OMDQ99983 421 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms