RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 UGT1A6P19224 532 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 HOXA11P31270 313 aaPredicted RBP17.64■□□□□ 0.41
TRAM1-201ENST00000262213 TAS2R39P59534 338 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 C1QTNF8P60827 252 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 ARHGAP1Q07960 439 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 SEPT6Q14141 434 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 USP41Q3LFD5 358 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 ITPRIPL1Q6GPH6 555 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 HMBOX1Q6NT76 420 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 IFNLR1Q8IU57 520 aaPredicted RBP17.64■□□□□ 0.41
TRAM1-201ENST00000262213 LRRC52Q8N7C0 313 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 B3GALNT2Q8NCR0 500 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 ZNF597Q96LX8 424 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 MCMBPQ9BTE3 642 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 MAF1Q9H063 256 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 ELP3Q9H9T3 547 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 NCKIPSDQ9NZQ3 722 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 AURKCQ9UQB9 309 aa17.64■□□□□ 0.41
TRAM1-201ENST00000262213 MAGEB16A2A368 324 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 FAM149AA5PLN7 773 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 YJEFN3A6XGL0 299 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 BTBD19C9JJ37 291 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 DFFAO00273 331 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 AURKAO14965 403 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 UBDO15205 165 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 NCAM1P13591 858 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 KCNA5P22460 613 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 IGFBP6P24592 240 aaPredicted RBP17.63■□□□□ 0.41
TRAM1-201ENST00000262213 SOX11P35716 441 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 SCNN1AP37088 669 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 RHDQ02161 417 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 SULT2A1Q06520 285 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 DUS1LQ6P1R4 473 aaKnown RBP17.63■□□□□ 0.41
TRAM1-201ENST00000262213 ARHGAP36Q6ZRI8 547 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 LINC01465Q8N7H1 131 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 MIPOL1Q8TD10 442 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 OSMRQ99650 979 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 OSBPL11Q9BXB4 747 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 PLEKHA5Q9HAU0 1116 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 OLAHQ9NV23 265 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 C9JVG2 144 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 H3BNH8 94 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 SOCS2O14508 198 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 MRASO14807 208 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 ADSLP30566 484 aaPredicted RBP17.63■□□□□ 0.41
TRAM1-201ENST00000262213 GRIA3P42263 894 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 SLC12A2P55011 1212 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 KLHL35Q6PF15 583 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 CLVS1Q8IUQ0 354 aaPredicted RBP17.63■□□□□ 0.41
TRAM1-201ENST00000262213 ZNF786Q8N393 782 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 RIN3Q8TB24 985 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 SPPL2BQ8TCT7 592 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 GPR78Q96P69 363 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 UNC93B1Q9H1C4 597 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 MRPL46Q9H2W6 279 aaKnown RBP17.63■□□□□ 0.41
TRAM1-201ENST00000262213 FAM124BQ9H5Z6 455 aaPredicted RBP17.63■□□□□ 0.41
TRAM1-201ENST00000262213 BPTFQ12830 3046 aa17.63■□□□□ 0.41
TRAM1-201ENST00000262213 HTRA2O43464 458 aaPredicted RBP17.62■□□□□ 0.41
TRAM1-201ENST00000262213 HUS1O60921 280 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 YBX3P16989 372 aaKnown RBP eCLIP17.62■□□□□ 0.417e-10■□□□□ 10.2
TRAM1-201ENST00000262213 YWHAQP27348 245 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 SLC7A2P52569 658 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 STX5Q13190 355 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 ADRM1Q16186 407 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 ZNF470Q6ECI4 717 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 CLEC6AQ6EIG7 209 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 TRIM74Q86UV6 250 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 TRIM73Q86UV7 250 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 CARM1Q86X55 608 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 CPNE9Q8IYJ1 553 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 DUSP16Q9BY84 665 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 RNF39Q9H2S5 420 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 FBRSL1Q9HCM7 1045 aaKnown RBP17.62■□□□□ 0.41
TRAM1-201ENST00000262213 SUCOQ9UBS9 1254 aaKnown RBP17.62■□□□□ 0.41
TRAM1-201ENST00000262213 EBF1Q9UH73 591 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 LOC285556D6RIA3 1793 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 FYNP06241 537 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 GNAO1P09471 354 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 USP17L7P0C7H9 530 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 SLC1A2P43004 574 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 HK2P52789 917 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 TXNL4AP83876 142 aaKnown RBP17.62■□□□□ 0.41
TRAM1-201ENST00000262213 SOX4Q06945 474 aaPredicted RBP17.62■□□□□ 0.41
TRAM1-201ENST00000262213 PRPSAP1Q14558 356 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 ZBTB6Q15916 424 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 DCAF4L1Q3SXM0 396 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 NAPEPLDQ6IQ20 393 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 RWDD4Q6NW29 188 aaKnown RBP17.62■□□□□ 0.41
TRAM1-201ENST00000262213 BORAQ6PGQ7 559 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 POTEHQ6S545 545 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 FICDQ9BVA6 458 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 POLR2AP24928 1970 aaKnown RBP17.62■□□□□ 0.41
TRAM1-201ENST00000262213 TMX2-CTNND1H3BSU7 103 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 ZBTB7AO95365 584 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 C8BP07358 591 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 NPR3P17342 541 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 CDK9P50750 372 aaKnown RBP17.62■□□□□ 0.41
TRAM1-201ENST00000262213 PRKAA2P54646 552 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 LRP8Q14114 963 aa17.62■□□□□ 0.41
TRAM1-201ENST00000262213 GRIK4Q16099 956 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms