RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 MAFKO60675 156 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 PHF2O75151 1096 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 TMCC1O94876 653 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 PEX11BO96011 259 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 GEMIN4P57678 1058 aaKnown RBP11.75□□□□□ -0.53
PFDN1-201ENST00000261813 DYNLT1P63172 113 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 IL10RBQ08334 325 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 XRCC4Q13426 336 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 DHX34Q14147 1143 aaKnown RBP11.75□□□□□ -0.53
PFDN1-201ENST00000261813 CYTH1Q15438 398 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 INO80DQ53TQ3 878 aaPredicted RBP11.75□□□□□ -0.53
PFDN1-201ENST00000261813 NPNTQ6UXI9 565 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 SYDE1Q6ZW31 735 aaPredicted RBP11.75□□□□□ -0.53
PFDN1-201ENST00000261813 CACUL1Q86Y37 369 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 TMPRSS6Q8IU80 811 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 PGBD3Q8N328 593 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 ZBTB44Q8NCP5 570 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 OR2A12Q8NGT7 310 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 ATL2Q8NHH9 583 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 LRRN4Q8WUT4 740 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 AP1M1Q9BXS5 423 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 FAM126AQ9BYI3 521 aaPredicted RBP11.75□□□□□ -0.53
PFDN1-201ENST00000261813 CEP44Q9C0F1 390 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 BRD8Q9H0E9 1235 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 RSPH9Q9H1X1 276 aaPredicted RBP11.75□□□□□ -0.53
PFDN1-201ENST00000261813 SP110Q9HB58 689 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 CD93Q9NPY3 652 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 ZSCAN32Q9NX65 697 aa11.75□□□□□ -0.53
PFDN1-201ENST00000261813 BCCIPQ9P287 314 aaKnown RBP eCLIP11.75□□□□□ -0.53
PFDN1-201ENST00000261813 UBA2Q9UBT2 640 aaPredicted RBP11.75□□□□□ -0.53
PFDN1-201ENST00000261813 DRG1Q9Y295 367 aaKnown RBP11.75□□□□□ -0.53
PFDN1-201ENST00000261813 MCF2LO15068 1137 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 BNIP3LO60238 219 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 GAS8O95995 478 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 PECAM1P16284 738 aaPredicted RBP11.74□□□□□ -0.53
PFDN1-201ENST00000261813 MX2P20592 715 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 MCM3P25205 808 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 GARSP41250 739 aaKnown RBP11.74□□□□□ -0.53
PFDN1-201ENST00000261813 NRLP54845 237 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 RPS14P62263 151 aaKnown RBP11.74□□□□□ -0.53
PFDN1-201ENST00000261813 SRSF5Q13243 272 aaKnown RBP11.74□□□□□ -0.53
PFDN1-201ENST00000261813 ELAVL3Q14576 367 aaKnown RBP11.74□□□□□ -0.53
PFDN1-201ENST00000261813 KIAA1324Q6UXG2 1013 aaKnown RBP11.74□□□□□ -0.53
PFDN1-201ENST00000261813 DPY19L3Q6ZPD9 716 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 ADAT2Q7Z6V5 191 aaKnown RBP11.74□□□□□ -0.53
PFDN1-201ENST00000261813 LRRC49Q8IUZ0 686 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 ATPAF2Q8N5M1 289 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 PCDH20Q8N6Y1 951 aaKnown RBP11.74□□□□□ -0.53
PFDN1-201ENST00000261813 PRELID2Q8N945 189 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 CHST14Q8NCH0 376 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 MYRIPQ8NFW9 859 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 CCHCR1Q8TD31 782 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 CASKIN2Q8WXE0 1202 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 RUBCNQ92622 972 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 VOPP1Q96AW1 172 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 ISG20Q96AZ6 181 aaKnown RBP11.74□□□□□ -0.53
PFDN1-201ENST00000261813 SIPA1Q96FS4 1042 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 PKNOX2Q96KN3 472 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 OLFM3Q96PB7 478 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 TM6SF2Q9BZW4 377 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 FBRSQ9HAH7 460 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 LHX3Q9UBR4 397 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 PCYOX1Q9UHG3 505 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 HEY1Q9Y5J3 304 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 R4GN57 208 aa11.74□□□□□ -0.53
PFDN1-201ENST00000261813 FAM186AA6NE01 2351 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 CFAP69A5D8W1 941 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 FAM187AA6NFU0 413 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 HACD1B0YJ81 288 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 RNF103O00237 685 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 NDC80O14777 642 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 LILRB5O75023 590 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 LMNAP02545 664 aaKnown RBP11.73□□□□□ -0.53
PFDN1-201ENST00000261813 CTSLP07711 333 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 STIP1P31948 543 aaKnown RBP11.73□□□□□ -0.53
PFDN1-201ENST00000261813 COILP38432 576 aaPredicted RBP11.73□□□□□ -0.53
PFDN1-201ENST00000261813 SLC10A7Q0GE19 358 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 BYSLQ13895 437 aaKnown RBP11.73□□□□□ -0.53
PFDN1-201ENST00000261813 CARD16Q5EG05 197 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 ATXN7L2Q5T6C5 722 aaPredicted RBP11.73□□□□□ -0.53
PFDN1-201ENST00000261813 ZNF776Q68DI1 518 aaPredicted RBP11.73□□□□□ -0.53
PFDN1-201ENST00000261813 C8orf74Q6P047 294 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 CCDC137Q6PK04 289 aaKnown RBP11.73□□□□□ -0.53
PFDN1-201ENST00000261813 MMAAQ8IVH4 418 aaKnown RBP11.73□□□□□ -0.53
PFDN1-201ENST00000261813 FRMD1Q8N878 549 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 OR2AP1Q8NGE2 309 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 RLN3Q8WXF3 142 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 OR8D1Q8WZ84 308 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 PRCCQ92733 491 aaPredicted RBP11.73□□□□□ -0.53
PFDN1-201ENST00000261813 SLCO2A1Q92959 643 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 HDAC11Q96DB2 347 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 ZNF599Q96NL3 588 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 KRT12Q99456 494 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 SAE1Q9UBE0 346 aaPredicted RBP11.73□□□□□ -0.53
PFDN1-201ENST00000261813 SARDHQ9UL12 918 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 PCDHGA2Q9Y5H1 932 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 NUP205Q92621 2012 aa11.73□□□□□ -0.53
PFDN1-201ENST00000261813 PPP1R12AO14974 1030 aaPredicted RBP11.72□□□□□ -0.53
PFDN1-201ENST00000261813 MUSKO15146 869 aa11.72□□□□□ -0.53
PFDN1-201ENST00000261813 ALOX15BO15296 676 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms