RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 PPP1R3AQ16821 1122 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 SENP6Q9GZR1 1112 aaPredicted RBP19.56■□□□□ 0.72
SCARB1-201ENST00000261693 KATNBL1Q9H079 304 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 RBM38Q9H0Z9 239 aaKnown RBP19.56■□□□□ 0.72
SCARB1-201ENST00000261693 NSMCE4AQ9NXX6 385 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 CCDC167Q9P0B6 97 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 KCNH4Q9UQ05 1017 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 SCN4AP35499 1836 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 MYBPHLA2RUH7 354 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 AURKAO14965 403 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 XPOTO43592 962 aaKnown RBP19.56■□□□□ 0.72
SCARB1-201ENST00000261693 ADSLP30566 484 aaPredicted RBP19.56■□□□□ 0.72
SCARB1-201ENST00000261693 RANBP1P43487 201 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 HCAR3P49019 387 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 PLK1P53350 603 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 MGAT5BQ3V5L5 792 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 CYP2R1Q6VVX0 501 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 EGFL6Q8IUX8 553 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 TOP6BLQ8N6T0 577 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 LRTOMTQ8WZ04 291 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 TBL1YQ9BQ87 522 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 FICDQ9BVA6 458 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 SIK2Q9H0K1 926 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 MRPL46Q9H2W6 279 aaKnown RBP19.56■□□□□ 0.72
SCARB1-201ENST00000261693 NCKIPSDQ9NZQ3 722 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 EPS15L1Q9UBC2 864 aa19.56■□□□□ 0.72
SCARB1-201ENST00000261693 C7orf72A4D263 438 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 TRIM38O00635 465 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 MT-CO1P00395 513 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 CSHL1Q14406 222 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 RFTN1Q14699 578 aaPredicted RBP19.55■□□□□ 0.72
SCARB1-201ENST00000261693 PABPC1LQ4VXU2 614 aaKnown RBP19.55■□□□□ 0.72
SCARB1-201ENST00000261693 PCID2Q5JVF3 399 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 ZNF470Q6ECI4 717 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 LAYNQ6UX15 382 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 ZMIZ2Q8NF64 920 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 CEP70Q8NHQ1 597 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 HMGCLL1Q8TB92 370 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 VAT1Q99536 393 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 BRD8Q9H0E9 1235 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 COQ10BQ9H8M1 238 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 IPPQ9Y573 584 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 HNRNPRO43390 633 aaKnown RBP19.55■□□□□ 0.72
SCARB1-201ENST00000261693 KCNE1P15382 129 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 ZNF26P17031 533 aaPredicted RBP19.55■□□□□ 0.72
SCARB1-201ENST00000261693 KCNA5P22460 613 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 PCSK6P29122 969 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 AIF1P55008 147 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 UBXN11Q5T124 520 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 LINC00523Q86TU6 105 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 DRAXINQ8NBI3 349 aaPredicted RBP19.55■□□□□ 0.72
SCARB1-201ENST00000261693 FAM81AQ8TBF8 368 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 LENG1Q96BZ8 264 aaPredicted RBP19.55■□□□□ 0.72
SCARB1-201ENST00000261693 ASB9Q96DX5 294 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 PCED1BQ96HM7 432 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 AP4S1Q9Y587 144 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 TRPC5OSA6NMA1 111 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 H3BSA7 217 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 SMIM10L2AP0DMW4 78 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 SMIM10L2BP0DMW5 78 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 EPHX2P34913 555 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 SH3BGRP55822 239 aaPredicted RBP19.55■□□□□ 0.72
SCARB1-201ENST00000261693 C1QTNF8P60827 252 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 SULT2A1Q06520 285 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 SEPT6Q14141 434 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 UGP2Q16851 508 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 AGKQ53H12 422 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 TRPV6Q9H1D0 765 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 SNX13Q9Y5W8 968 aa19.55■□□□□ 0.72
SCARB1-201ENST00000261693 RBM47A0AV96 593 aaKnown RBP19.54■□□□□ 0.72
SCARB1-201ENST00000261693 PMPCBO75439 489 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 COL6A2P12110 1019 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 PSMC3P17980 439 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 CHRNA4P43681 627 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 ARCN1P48444 511 aaKnown RBP19.54■□□□□ 0.72
SCARB1-201ENST00000261693 PPIL2Q13356 520 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 TRIM25Q14258 630 aaKnown RBP19.54■□□□□ 0.72
SCARB1-201ENST00000261693 SNX17Q15036 470 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 INTS6LQ5JSJ4 861 aaKnown RBP19.54■□□□□ 0.72
SCARB1-201ENST00000261693 FASTKD5Q7L8L6 764 aaKnown RBP19.54■□□□□ 0.72
SCARB1-201ENST00000261693 FAM35AQ86V20 835 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 SPPL2BQ8TCT7 592 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 DPF3Q92784 378 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 MAELQ96JY0 434 aaKnown RBP19.54■□□□□ 0.72
SCARB1-201ENST00000261693 CROCCQ5TZA2 2017 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 STRNO43815 780 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 PYGLP06737 847 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 HSPA13P48723 471 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 APOFQ13790 326 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 RBM20Q5T481 1227 aaKnown RBP19.54■□□□□ 0.72
SCARB1-201ENST00000261693 OLFML2BQ68BL8 750 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 PELI3Q8N2H9 469 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 GPRC5AQ8NFJ5 357 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 GRIN3AQ8TCU5 1115 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 HSFX1Q9UBD0 423 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 DMTF1Q9Y222 760 aa19.54■□□□□ 0.72
SCARB1-201ENST00000261693 hCG_2014768A0A024R1R8 64 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 MEIS3P2A8K0S8 358 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 FBP2O00757 339 aa19.53■□□□□ 0.72
SCARB1-201ENST00000261693 SLC12A2P55011 1212 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms