RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 TRAF6Q9Y4K3 522 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 TMEM247A6NEH6 219 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 C19orf81C9J6K1 198 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 FOXD2O60548 495 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-201ENST00000261646 DNAJA2O60884 412 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 DBTP11182 482 aaKnown RBP16.36■□□□□ 0.21
SREBF1-201ENST00000261646 SEPHS1P49903 392 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 BNIP2Q12982 314 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 PPIL2Q13356 520 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 PDCD4Q53EL6 469 aaKnown RBP16.36■□□□□ 0.21
SREBF1-201ENST00000261646 ARMCX4Q5H9R4 360 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 TMEM26Q6ZUK4 368 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 PTGR2Q8N8N7 351 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-201ENST00000261646 NXNL1Q96CM4 212 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 MTERF3Q96E29 417 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 RHOJQ9H4E5 214 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 CACYBPQ9HB71 228 aaKnown RBP16.36■□□□□ 0.21
SREBF1-201ENST00000261646 TMEM161AQ9NX61 479 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 UBAP1Q9NZ09 502 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 A0A0J9YYE9 177 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 A0A1W2PPW3 197 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 MLNP12872 115 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 ERCC2P18074 760 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 LIMK2P53671 638 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 GRM3Q14832 879 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 FBXO47Q5MNV8 452 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 APOBEC3FQ8IUX4 373 aaKnown RBP16.35■□□□□ 0.21
SREBF1-201ENST00000261646 ANKRD13AQ8IZ07 590 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 SVOPQ8N4V2 548 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 SMYD1Q8NB12 490 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 TRIM62Q9BVG3 475 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 CHID1Q9BWS9 393 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 SMPD3Q9NY59 655 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-201ENST00000261646 SNPHO15079 494 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 VNN1O95497 513 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 GLP2RO95838 553 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 ATP6V1E1P36543 226 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 PTRHD1Q6GMV3 140 aaKnown RBP16.35■□□□□ 0.21
SREBF1-201ENST00000261646 ILDR2Q71H61 639 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 CUZD1Q86UP6 607 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 SIX5Q8N196 739 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 DQX1Q8TE96 717 aaKnown RBP16.35■□□□□ 0.21
SREBF1-201ENST00000261646 CCDC106Q9BWC9 280 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 AP5M1Q9H0R1 490 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 SYTL2Q9HCH5 934 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 SETD4Q9NVD3 440 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 IDH3BO43837 385 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 TSC22D2O75157 780 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 KATNA1O75449 491 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 SLC2A4P14672 509 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 ALOX15P16050 662 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-201ENST00000261646 PCID2Q5JVF3 399 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 ADGRG6Q86SQ4 1221 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 FAM83AQ86UY5 434 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 ANKRD52Q8NB46 1076 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 SETD9Q8NE22 299 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 CANT1Q8WVQ1 401 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 S100ZQ8WXG8 99 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 ZHX1-C8orf76Q96EF9 292 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 AGAP2Q99490 1192 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 BTBD3Q9Y2F9 522 aa16.35■□□□□ 0.21
SREBF1-201ENST00000261646 CLDN25C9JDP6 229 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 B4GALT5O43286 388 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 CPB1P15086 417 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 YAP1P46937 504 aaKnown RBP16.34■□□□□ 0.21
SREBF1-201ENST00000261646 CDK9P50750 372 aaKnown RBP16.34■□□□□ 0.21
SREBF1-201ENST00000261646 CCNIQ14094 377 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 CACHD1Q5VU97 1274 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 PAGE2Q7Z2X7 111 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 ADGRF2Q8IZF7 708 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 CMASQ8NFW8 434 aaPredicted RBP16.34■□□□□ 0.21
SREBF1-201ENST00000261646 OR52K2Q8NGK3 314 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 METTL6Q8TCB7 284 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 C12orf43Q96C57 262 aaKnown RBP16.34■□□□□ 0.21
SREBF1-201ENST00000261646 ACO2Q99798 780 aaKnown RBP16.34■□□□□ 0.21
SREBF1-201ENST00000261646 EPB41L1Q9H4G0 881 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 CACNA2D2Q9NY47 1150 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 POLG2Q9UHN1 485 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 PHF24Q9UPV7 400 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 A0A0J9YVX5 310 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 AGRPO00253 132 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 RPS9P46781 194 aaKnown RBP16.34■□□□□ 0.21
SREBF1-201ENST00000261646 STT3AP46977 705 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 TPTEP56180 551 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 VPS26BQ4G0F5 336 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 ZC3H12BQ5HYM0 836 aaKnown RBP16.34■□□□□ 0.21
SREBF1-201ENST00000261646 TBL1YQ9BQ87 522 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 TRIM54Q9BYV2 358 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 WDR12Q9GZL7 423 aaKnown RBP16.34■□□□□ 0.21
SREBF1-201ENST00000261646 CDT1Q9H211 546 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 SNTG2Q9NY99 539 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 C3orf18Q9UK00 162 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 WDR37Q9Y2I8 494 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 A0A087X1B8 175 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 IRF6O14896 467 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 POU1F1P28069 291 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 ZBED5Q49AG3 693 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 PPP1R26Q5T8A7 1209 aaPredicted RBP16.34■□□□□ 0.21
SREBF1-201ENST00000261646 METTL7BQ6UX53 244 aa16.34■□□□□ 0.21
SREBF1-201ENST00000261646 STX19Q8N4C7 294 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms