RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 TRIM56Q9BRZ2 755 aaKnown RBP17.72■□□□□ 0.43
SRSF1-201ENST00000258962 OSBPL6Q9BZF3 934 aa17.72■□□□□ 0.43
SRSF1-201ENST00000258962 STMN4Q9H169 189 aaPredicted RBP17.72■□□□□ 0.43
SRSF1-201ENST00000258962 MAGEH1Q9H213 219 aa17.72■□□□□ 0.43
SRSF1-201ENST00000258962 ACSS3Q9H6R3 686 aa17.72■□□□□ 0.43
SRSF1-201ENST00000258962 PDFQ9HBH1 243 aa17.72■□□□□ 0.43
SRSF1-201ENST00000258962 LTB4R2Q9NPC1 389 aa17.72■□□□□ 0.43
SRSF1-201ENST00000258962 HPS4Q9NQG7 708 aa17.72■□□□□ 0.43
SRSF1-201ENST00000258962 UBP1Q9NZI7 540 aa17.72■□□□□ 0.43
SRSF1-201ENST00000258962 ZC3H7BQ9UGR2 993 aaKnown RBP17.72■□□□□ 0.43
SRSF1-201ENST00000258962 NDRG2Q9UN36 371 aaKnown RBP17.72■□□□□ 0.43
SRSF1-201ENST00000258962 TTLL3Q9Y4R7 772 aa17.72■□□□□ 0.43
SRSF1-201ENST00000258962 TCRBV9S1A1TA0A576 114 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 AGTP01019 485 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 NR1D1P20393 614 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 COL9A1P20849 921 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 MGAT1P26572 445 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 CTHP32929 405 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 SOX9P48436 509 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 SESN2P58004 480 aaPredicted RBP17.71■□□□□ 0.43
SRSF1-201ENST00000258962 PRPSAP1Q14558 356 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 EML3Q32P44 896 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 CXorf57Q6NSI4 855 aaKnown RBP17.71■□□□□ 0.43
SRSF1-201ENST00000258962 UNC5AQ6ZN44 842 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 HTR3DQ70Z44 454 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.71■□□□□ 0.43
SRSF1-201ENST00000258962 XPO6Q96QU8 1125 aaKnown RBP17.71■□□□□ 0.43
SRSF1-201ENST00000258962 PRRX2Q99811 253 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 ECT2Q9H8V3 914 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 LRRC40Q9H9A6 602 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 LSM7Q9UK45 103 aaKnown RBP17.71■□□□□ 0.43
SRSF1-201ENST00000258962 TBC1D30Q9Y2I9 924 aa17.71■□□□□ 0.43
SRSF1-201ENST00000258962 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.7■□□□□ 0.42
SRSF1-201ENST00000258962 TBL1XO60907 577 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 CDH16O75309 829 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 SPAG6O75602 509 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 MT-CYBP00156 380 aaPredicted RBP17.7■□□□□ 0.42
SRSF1-201ENST00000258962 DCNP07585 359 aaKnown RBP17.7■□□□□ 0.42
SRSF1-201ENST00000258962 NUMBP49757 651 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 RENBPP51606 427 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 NUBP1P53384 320 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 CRADDP78560 199 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 ZNF177Q13360 481 aaPredicted RBP17.7■□□□□ 0.42
SRSF1-201ENST00000258962 EMC10Q5UCC4 262 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 KDM7AQ6ZMT4 941 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 SETD3Q86TU7 594 aaPredicted RBP17.7■□□□□ 0.42
SRSF1-201ENST00000258962 TDRPQ86YL5 185 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 CYP4X1Q8N118 509 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 PGBD5Q8N414 524 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 OTUB2Q96DC9 234 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 NT5MQ9NPB1 228 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 SYBUQ9NX95 663 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 MTF2Q9Y483 593 aaPredicted RBP17.7■□□□□ 0.42
SRSF1-201ENST00000258962 MAD1L1Q9Y6D9 718 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 TICRRQ7Z2Z1 1910 aa17.7■□□□□ 0.42
SRSF1-201ENST00000258962 ILVBLA1L0T0 632 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 SDR42E2A6NKP2 422 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 POC1B-GALNT4F8VUJ3 575 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 PSMD3O43242 534 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 PIAS1O75925 651 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 ANXA9O76027 345 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 RHOCP08134 193 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 GSTA2P09210 222 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 HPDP32754 393 aaPredicted RBP17.69■□□□□ 0.42
SRSF1-201ENST00000258962 MARC1Q5VT66 337 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 STEAP4Q687X5 459 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 LEKR1Q6ZMV7 388 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 PRPF39Q86UA1 669 aaKnown RBP17.69■□□□□ 0.42
SRSF1-201ENST00000258962 BBS7Q8IWZ6 715 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 ADGRG2Q8IZP9 1017 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 RIBC1Q8N443 379 aaPredicted RBP17.69■□□□□ 0.42
SRSF1-201ENST00000258962 HJURPQ8NCD3 748 aaPredicted RBP17.69■□□□□ 0.42
SRSF1-201ENST00000258962 STAMBPL1Q96FJ0 436 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 APOL2Q9BQE5 337 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 DHRS4Q9BTZ2 278 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 FETUBQ9UGM5 382 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 SLC24A2Q9UI40 661 aa17.69■□□□□ 0.42
SRSF1-201ENST00000258962 AAR2Q9Y312 384 aaKnown RBP17.69■□□□□ 0.42
SRSF1-201ENST00000258962 OTOL1A6NHN0 477 aaPredicted RBP17.68■□□□□ 0.42
SRSF1-201ENST00000258962 NEBLO76041 1014 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 GLDCP23378 1020 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 TARSP26639 723 aaKnown RBP17.68■□□□□ 0.42
SRSF1-201ENST00000258962 ADRA1AP35348 466 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 GEMP55040 296 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 GEMIN4P57678 1058 aaKnown RBP17.68■□□□□ 0.42
SRSF1-201ENST00000258962 MAXP61244 160 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 SKOR1P84550 965 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 NIPAL4Q0D2K0 466 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 IHHQ14623 411 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 LBRQ14739 615 aaKnown RBP17.68■□□□□ 0.42
SRSF1-201ENST00000258962 RASA2Q15283 850 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 KLHL38Q2WGJ6 581 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 TMCO4Q5TGY1 634 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 CPXM2Q8N436 756 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 IMP4Q96G21 291 aaKnown RBP17.68■□□□□ 0.42
SRSF1-201ENST00000258962 ACE2Q9BYF1 805 aaPredicted RBP17.68■□□□□ 0.42
SRSF1-201ENST00000258962 SLC25A51Q9H1U9 297 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 KCNH6Q9H252 994 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 PPCSQ9HAB8 311 aa17.68■□□□□ 0.42
SRSF1-201ENST00000258962 TBK1Q9UHD2 729 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms