RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 MEI4A8MW99 385 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 WNT7AO00755 349 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 RGS5O15539 181 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 SASH3O75995 380 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 ITGA2BP08514 1039 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 HIPK3Q9H422 1215 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 ARMCX1Q9P291 453 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 CYP7B1O75881 506 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 LRPAP1P30533 357 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 SPIDRQ14159 915 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 PTPN20Q4JDL3 420 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 ZDHHC20Q5W0Z9 365 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 DDHD1Q8NEL9 900 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 ZFP28Q8NHY6 868 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 ZBTB10Q96DT7 871 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 FAIM2Q9BWQ8 316 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 ADRA1BP35368 520 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 PDK4Q16654 411 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 TTMPQ5BVD1 217 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 OSBPL10Q9BXB5 764 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 PRKAG3Q9UGI9 489 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 FBXO5Q9UKT4 447 aa19.13■□□□□ 0.65
PTPRE-201ENST00000254667 SLC28A1O00337 649 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 OR1D2P34982 312 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 PAGE1O75459 146 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 ADH1CP00326 375 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 ZCCHC18P0CG32 403 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 NOMO1Q15155 1222 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 ARHGAP17Q68EM7 881 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 PCDHGC3Q9UN70 934 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 RAP2CQ9Y3L5 183 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 CXCL14O95715 111 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 SHBGP04278 402 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 PARP15Q460N3 678 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 DNAJC14Q6Y2X3 702 aaPredicted RBP19.12■□□□□ 0.65
PTPRE-201ENST00000254667 JOSD2Q8TAC2 188 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 POP5Q969H6 163 aaKnown RBP19.12■□□□□ 0.65
PTPRE-201ENST00000254667 TPD52L3Q96J77 140 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 PDZD7Q9H5P4 517 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 NDOR1Q9UHB4 597 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 ZNF541Q9H0D2 1346 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 TK2O00142 265 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 CLOCKO15516 846 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 FAM20BO75063 409 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 ATP6V1C1P21283 382 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 EPS8Q12929 822 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 SNX30Q5VWJ9 437 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 CACUL1Q86Y37 369 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 OR4L1Q8NH43 312 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 P2RY11Q96G91 374 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 FAXDC2Q96IV6 333 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 ACE2Q9BYF1 805 aaPredicted RBP19.12■□□□□ 0.65
PTPRE-201ENST00000254667 TPRKBQ9Y3C4 175 aa19.12■□□□□ 0.65
PTPRE-201ENST00000254667 IGKV6D-41A0A0C4DH26 115 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 ENO4A6NNW6 628 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 ULK1O75385 1050 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 OTCP00480 354 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 PROCP04070 461 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 CCDC159P0C7I6 412 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 GRIA4P48058 902 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 RNF43Q68DV7 783 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 XYLT1Q86Y38 959 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 RBFAQ8N0V3 343 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 SNX3O60493 162 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 ABCG1P45844 678 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 WNT3AP56704 352 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 TARBP2Q15633 366 aaKnown RBP19.11■□□□□ 0.65
PTPRE-201ENST00000254667 PAGE2Q7Z2X7 111 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 RASGEF1CQ8N431 466 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 CXorf56Q9H5V9 222 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 PTPRHQ9HD43 1115 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 LEF1Q9UJU2 399 aaPredicted RBP19.11■□□□□ 0.65
PTPRE-201ENST00000254667 TLL1O43897 1013 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 TSPAN1O60635 241 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 CBX6O95503 412 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 ZNF280AP59817 542 aaPredicted RBP19.11■□□□□ 0.65
PTPRE-201ENST00000254667 SDHAF4Q5VUM1 108 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 SPRYD7Q5W111 196 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 OLFML2BQ68BL8 750 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 LUZP2Q86TE4 346 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 ZDHHC13Q8IUH4 622 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 TIFAQ96CG3 184 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 RMND5BQ96G75 393 aaPredicted RBP19.11■□□□□ 0.65
PTPRE-201ENST00000254667 DEFB118Q96PH6 123 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 PCDHB18PQ96TA0 734 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 SEZ6LQ9BYH1 1024 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 GLOD4Q9HC38 313 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 CORO2BQ9UQ03 480 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 NOS3P29474 1203 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 GABRB2P47870 512 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 COPG2Q9UBF2 871 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 TBC1D30Q9Y2I9 924 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 ANKRD26Q9UPS8 1709 aa19.11■□□□□ 0.65
PTPRE-201ENST00000254667 BUD23O43709 281 aaKnown RBP19.1■□□□□ 0.65
PTPRE-201ENST00000254667 HTR1BP28222 390 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 ALFQ53S48 1182 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 OTUD3Q5T2D3 398 aaPredicted RBP19.1■□□□□ 0.65
PTPRE-201ENST00000254667 LIPMQ5VYY2 423 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 STK32CQ86UX6 486 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 IRF2BP1Q8IU81 584 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms