RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 DKK3Q9UBP4 350 aa20.66■□□□□ 0.9
RARA-201ENST00000254066 CARD8Q9Y2G2 431 aa20.66■□□□□ 0.9
RARA-201ENST00000254066 TRAF6Q9Y4K3 522 aa20.66■□□□□ 0.9
RARA-201ENST00000254066 NOX1Q9Y5S8 564 aa20.66■□□□□ 0.9
RARA-201ENST00000254066 JRKO75564 520 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 SRP72O76094 671 aaKnown RBP20.65■□□□□ 0.9
RARA-201ENST00000254066 SEC24DO94855 1032 aaPredicted RBP20.65■□□□□ 0.9
RARA-201ENST00000254066 HPCAL1P37235 193 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 ZNF699Q32M78 642 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 CYP2R1Q6VVX0 501 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 CLEC4DQ8WXI8 215 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 MTG1Q9BT17 334 aaPredicted RBP20.65■□□□□ 0.9
RARA-201ENST00000254066 SLC25A23Q9BV35 468 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 SEZ6LQ9BYH1 1024 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 MRM3Q9HC36 420 aaKnown RBP20.65■□□□□ 0.9
RARA-201ENST00000254066 DDHD2O94830 711 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 ERVK-10P10266 1014 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 TGM1P22735 817 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 IDUAP35475 653 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 CBX2Q14781 532 aaPredicted RBP20.65■□□□□ 0.9
RARA-201ENST00000254066 NEDD8Q15843 81 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 CCDC14Q49A88 953 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 TBCELQ5QJ74 424 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 SH3PXD2AQ5TCZ1 1133 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 STRA8Q7Z7C7 330 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 SFRP1Q8N474 314 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 VMP1Q96GC9 406 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 FAR2Q96K12 515 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 TARS2Q9BW92 718 aaKnown RBP20.65■□□□□ 0.9
RARA-201ENST00000254066 LRRC4Q9HBW1 653 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 TIMM22Q9Y584 194 aa20.65■□□□□ 0.9
RARA-201ENST00000254066 H0YAE9 185 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 SDHDO14521 159 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 NPHS1O60500 1241 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 LEPRP48357 1165 aaKnown RBP20.64■□□□□ 0.89
RARA-201ENST00000254066 PGM5Q15124 567 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 TFAP2DQ7Z6R9 452 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 LSMEM2Q8N112 164 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 KDM1BQ8NB78 822 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 ROPN1LQ96C74 230 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 TSNARE1Q96NA8 513 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 MTMR12Q9C0I1 747 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 SMPD3Q9NY59 655 aaPredicted RBP20.64■□□□□ 0.89
RARA-201ENST00000254066 FBXO40Q9UH90 709 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 NTRK1P04629 796 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 SNRPB2P08579 225 aaKnown RBP20.64■□□□□ 0.89
RARA-201ENST00000254066 OPRL1P41146 370 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 CSRP3P50461 194 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 SESN2P58004 480 aaPredicted RBP20.64■□□□□ 0.89
RARA-201ENST00000254066 FKBP1AP62942 108 aaKnown RBP20.64■□□□□ 0.89
RARA-201ENST00000254066 CRADDP78560 199 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 BROXQ5VW32 411 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 GTF2IRD2BQ6EKJ0 949 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 GTF2IRD2Q86UP8 949 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 ITIH5Q86UX2 942 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 PARP8Q8N3A8 854 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 SHCBP1Q8NEM2 672 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 ACER1Q8TDN7 264 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 SYTL5Q8TDW5 730 aaPredicted RBP20.64■□□□□ 0.89
RARA-201ENST00000254066 CYGBQ8WWM9 190 aa20.64■□□□□ 0.89
RARA-201ENST00000254066 MTRF1O75570 445 aaKnown RBP20.63■□□□□ 0.89
RARA-201ENST00000254066 DNAJB5O75953 348 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 PSAPP07602 524 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 TFE3P19532 575 aaPredicted RBP20.63■□□□□ 0.89
RARA-201ENST00000254066 CYP2F1P24903 491 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 EEF1DP29692 281 aaKnown RBP20.63■□□□□ 0.89
RARA-201ENST00000254066 GRM5P41594 1212 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 GRIA3P42263 894 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 NAGLUP54802 743 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 TNK2Q07912 1038 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 RALGDSQ12967 914 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 FAM182AQ5T1J6 154 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 C6orf183Q5T699 404 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 XRRA1Q6P2D8 792 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 KCNT2Q6UVM3 1135 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 TMEM151AQ8N4L1 468 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 MARK4Q96L34 752 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 NDEL1Q9GZM8 345 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 MUC3BQ9H195 1237 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 XYLT2Q9H1B5 865 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 AKIP1Q9NQ31 210 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 ZNF277Q9NRM2 450 aaPredicted RBP20.63■□□□□ 0.89
RARA-201ENST00000254066 IFT80Q9P2H3 777 aaPredicted RBP20.63■□□□□ 0.89
RARA-201ENST00000254066 WDR81Q562E7 1941 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 DHRS12A0PJE2 317 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 NFIBO00712 420 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 IL18RAPO95256 599 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 POLR2EP19388 210 aaKnown RBP20.63■□□□□ 0.89
RARA-201ENST00000254066 GMPRP36959 345 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 GPD2P43304 727 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 IRF9Q00978 393 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 C15orf59Q2T9L4 293 aaPredicted RBP20.63■□□□□ 0.89
RARA-201ENST00000254066 HSDL1Q3SXM5 330 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 SPATS1Q496A3 300 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 TRNP1Q6NT89 227 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 MMAAQ8IVH4 418 aaKnown RBP20.63■□□□□ 0.89
RARA-201ENST00000254066 STYXQ8WUJ0 223 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 HTR3CQ8WXA8 447 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 SNX19Q92543 992 aa20.63■□□□□ 0.89
RARA-201ENST00000254066 BEGAINQ9BUH8 593 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms