RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 GDE1Q9NZC3 331 aa3.8□□□□□ -1.8
RBM39-201ENST00000253363 GRHPRQ9UBQ7 328 aa3.8□□□□□ -1.8
RBM39-201ENST00000253363 HOOK1Q9UJC3 728 aaKnown RBP3.8□□□□□ -1.8
RBM39-201ENST00000253363 GINS2Q9Y248 185 aa3.8□□□□□ -1.8
RBM39-201ENST00000253363 ZNF711Q9Y462 761 aa3.8□□□□□ -1.8
RBM39-201ENST00000253363 USP15Q9Y4E8 981 aaPredicted RBP3.8□□□□□ -1.8
RBM39-201ENST00000253363 A0A087WV62 115 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 PVALEFA0A1B0GWK0 134 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 KIF2AO00139 706 aaPredicted RBP3.79□□□□□ -1.8
RBM39-201ENST00000253363 CAPN9O14815 690 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 SOCS5O75159 536 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 TADA2AO75478 443 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 RECQL4O94761 1208 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 HPXP02790 462 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 DHRS4L1P0CG22 281 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 HNRNPLP14866 589 aaKnown RBP eCLIP3.79□□□□□ -1.8
RBM39-201ENST00000253363 RPS2P15880 293 aaKnown RBP3.79□□□□□ -1.8
RBM39-201ENST00000253363 CTSSP25774 331 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 AARSP49588 968 aaKnown RBP eCLIP3.79□□□□□ -1.84e-6■□□□□ 9.4
RBM39-201ENST00000253363 LIG4P49917 911 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 CLCN4P51793 760 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 NPEPPSP55786 919 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 ZXDAP98168 799 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 GALNT1Q10472 559 aaPredicted RBP3.79□□□□□ -1.8
RBM39-201ENST00000253363 RESTQ13127 1097 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 SLC39A14Q15043 492 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 PTPAQ15257 358 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 PSMD5Q16401 504 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 PLPP4Q5VZY2 271 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 MCTP1Q6DN14 999 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 RAB12Q6IQ22 244 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 RINT1Q6NUQ1 792 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 PACS1Q6VY07 963 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 CCDC186Q7Z3E2 898 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.79□□□□□ -1.8
RBM39-201ENST00000253363 GALNT7Q86SF2 657 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 TRIM74Q86UV6 250 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 TRIM73Q86UV7 250 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 METTL23Q86XA0 190 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 SPPL2CQ8IUH8 684 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 BCL6BQ8N143 479 aaPredicted RBP3.79□□□□□ -1.8
RBM39-201ENST00000253363 NUP93Q8N1F7 819 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 IQUBQ8NA54 791 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 ZSCAN18Q8TBC5 510 aaPredicted RBP3.79□□□□□ -1.8
RBM39-201ENST00000253363 CALML6Q8TD86 181 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 DEPDC1BQ8WUY9 529 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 ZNF845Q96IR2 970 aaPredicted RBP3.79□□□□□ -1.8
RBM39-201ENST00000253363 PI4K2AQ9BTU6 479 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 TXLNGYQ9BZA5 131 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 SLC2A4RGQ9NR83 387 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 RGL1Q9NZL6 768 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 NUDT5Q9UKK9 219 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 ITGA11Q9UKX5 1188 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 C19orf53Q9UNZ5 99 aaPredicted RBP3.79□□□□□ -1.8
RBM39-201ENST00000253363 MRPS17Q9Y2R5 130 aaKnown RBP3.79□□□□□ -1.8
RBM39-201ENST00000253363 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.79□□□□□ -1.8
RBM39-201ENST00000253363 ATG2AQ2TAZ0 1938 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 PLXNA4Q9HCM2 1894 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 A0A0A6YYJ9 748 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 PGPEP1LA6NFU8 196 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 H0Y626 953 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 M0QZQ0 153 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 NRP1O14786 923 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 CLDN3O15551 220 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 STX6O43752 255 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 DYRK3O43781 588 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 STX10O60499 249 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 EPN2O95208 641 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 H2AFB1P0C5Y9 115 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 H2AFB2P0C5Z0 115 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 BRAFP15056 766 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 FPR1P21462 350 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 ATP5F1P24539 256 aaPredicted RBP3.79□□□□□ -1.8
RBM39-201ENST00000253363 KLRC2P26717 231 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 APEX1P27695 318 aaKnown RBP3.79□□□□□ -1.8
RBM39-201ENST00000253363 MLH1P40692 756 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 PPP3CCP48454 512 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 CLCN5P51795 746 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 HK3P52790 923 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 C17orf67Q0P5P2 114 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 ZBTB17Q13105 803 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 BMT2Q1RMZ1 405 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 KHDC1Q4VXA5 237 aaKnown RBP3.79□□□□□ -1.8
RBM39-201ENST00000253363 RRAGBQ5VZM2 374 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 SLC8B1Q6J4K2 584 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 RPUSD3Q6P087 351 aaKnown RBP3.79□□□□□ -1.8
RBM39-201ENST00000253363 LPCAT2Q7L5N7 544 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 GPBP1Q86WP2 473 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 MIB1Q86YT6 1006 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 GLB1L2Q8IW92 636 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 DCP1BQ8IZD4 617 aaKnown RBP3.79□□□□□ -1.8
RBM39-201ENST00000253363 STPG3Q8N7X2 389 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 RNF152Q8N8N0 203 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 TMEM161BQ8NDZ6 487 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.79□□□□□ -1.81e-8■■■■□ 25.8
RBM39-201ENST00000253363 SHC3Q92529 594 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 FAM122AQ96E09 287 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 MISP3Q96FF7 219 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 BICD1Q96G01 975 aa3.79□□□□□ -1.8
RBM39-201ENST00000253363 CFAP36Q96G28 342 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms