RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 MTA1Q13330 715 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 KIF19Q2TAC6 998 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 MBLAC2Q68D91 279 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ABRAXAS1Q6UWZ7 409 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 TRIM67Q6ZTA4 783 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 LRRC49Q8IUZ0 686 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 CNTN4Q8IWV2 1026 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 FBXO16Q8IX29 292 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ANKRD52Q8NB46 1076 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 SHKBP1Q8TBC3 707 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 DIS3LQ8TF46 1054 aaKnown RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ROPN1LQ96C74 230 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 HPDLQ96IR7 371 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 CNDP1Q96KN2 507 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 CDRT15Q96T59 188 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 MRPL45Q9BRJ2 306 aaKnown RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 BDH2Q9BUT1 245 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 UNC93B1Q9H1C4 597 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 PARVBQ9HBI1 364 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 SPAG4Q9NPE6 437 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 RIC8BQ9NVN3 520 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 MOSPD1Q9UJG1 213 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 BAG5Q9UL15 447 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 FZD10Q9ULW2 581 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 VPS9D1Q9Y2B5 631 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ZNF711Q9Y462 761 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 WASF2Q9Y6W5 498 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 LOC100653049A0A140TA62 436 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 TPP1O14773 563 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 HCRTO43612 131 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 KRT34O76011 436 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 H6PDO95479 791 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 FGF3P11487 239 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 CD1EP15812 388 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 PAX3P23760 479 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 EEF1B2P24534 225 aaKnown RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 BST2Q10589 180 aaKnown RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 CDH17Q12864 832 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 SLC14A2Q15849 920 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 TRIM16LQ309B1 348 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 DUSP28Q4G0W2 176 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 C9orf131Q5VYM1 1079 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 NPNTQ6UXI9 565 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 NUDT18Q6ZVK8 323 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 STRA8Q7Z7C7 330 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 OSTM1Q86WC4 334 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 TREML1Q86YW5 311 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 LRRC71Q8N4P6 559 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 COLGALT1Q8NBJ5 622 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 FBXO27Q8NI29 283 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 GTF3C2Q8WUA4 911 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 FAM149B1Q96BN6 582 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 TMA16Q96EY4 203 aaKnown RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 GRIP2Q9C0E4 1043 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 KRT82Q9NSB4 513 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 CLIC5Q9NZA1 410 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 DTLQ9NZJ0 730 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 IGSF9Q9P2J2 1179 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 GNPTGQ9UJJ9 305 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 APPL1Q9UKG1 709 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 MFHAS1Q9Y4C4 1052 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 UBDO15205 165 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 BCL10O95999 233 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 PGK2P07205 417 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 WARSP23381 471 aaKnown RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 RBL1P28749 1068 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 IDH3AP50213 366 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ATP4BP51164 291 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ZNF157P51786 506 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 LIMK2P53671 638 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 GOLGA7BQ2TAP0 167 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 MTX3Q5HYI7 312 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 TIGD7Q6NT04 549 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ZYG11AQ6WRX3 759 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 PRR23BQ6ZRT6 265 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 TMEM135Q86UB9 458 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 GALNT4Q8N4A0 578 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 LZTR1Q8N653 840 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 CCNYL1Q8N7R7 359 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 RNF149Q8NC42 400 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 KCTD15Q96SI1 283 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 SH3GL1Q99961 368 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 TUBA1CQ9BQE3 449 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 VANGL2Q9ULK5 521 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 MTF2Q9Y483 593 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 AQP12BA6NM10 295 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 H0Y626 953 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 EEF2KO00418 725 aaKnown RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 KDM1AO60341 852 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 E2F6O75461 281 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 TRIM16O95361 564 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 BMP10O95393 424 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 S100BP04271 92 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 GPIP06744 558 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 INSRRP14616 1297 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ATP5F1P24539 256 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 SLC7A1P30825 629 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 IREB2P48200 963 aaKnown RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 PSMD8P48556 350 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 HCAR3P49019 387 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms