RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 DCAKDQ8WVC6 231 aa18.95■□□□□ 0.62
TNFSF9-201ENST00000245817 FEM1CQ96JP0 617 aa18.95■□□□□ 0.62
TNFSF9-201ENST00000245817 NUDCD1Q96RS6 583 aa18.95■□□□□ 0.62
TNFSF9-201ENST00000245817 KIFC1Q9BW19 673 aa18.95■□□□□ 0.62
TNFSF9-201ENST00000245817 ABCB8Q9NUT2 735 aa18.95■□□□□ 0.62
TNFSF9-201ENST00000245817 LMCD1Q9NZU5 365 aa18.95■□□□□ 0.62
TNFSF9-201ENST00000245817 TXNDC16Q9P2K2 825 aa18.95■□□□□ 0.62
TNFSF9-201ENST00000245817 ACTL7BQ9Y614 415 aa18.95■□□□□ 0.62
TNFSF9-201ENST00000245817 WNT6Q9Y6F9 365 aa18.95■□□□□ 0.62
TNFSF9-201ENST00000245817 TRANK1O15050 2925 aa18.95■□□□□ 0.62
TNFSF9-201ENST00000245817 EPOP01588 193 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 TYRP14679 529 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 HLA-DPA1P20036 260 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 ADRA1DP25100 572 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 CD70P32970 193 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 PLK1P53350 603 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 GABPB1Q06547 395 aaPredicted RBP18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 NSUN2Q08J23 767 aaKnown RBP eCLIP18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 MGAT5Q09328 741 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 HYAL1Q12794 435 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 NAB1Q13506 487 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 SEPT6Q14141 434 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 PLEKHG6Q3KR16 790 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 LY6G5CQ5SRR4 150 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 RNF43Q68DV7 783 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 ANKRD54Q6NXT1 300 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 GET4Q7L5D6 327 aaPredicted RBP18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 RASSF3Q86WH2 238 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 CNPY4Q8N129 248 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 CERS2Q96G23 380 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 EXOC2Q96KP1 924 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 CAPS2Q9BXY5 557 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 NOD2Q9HC29 1040 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 DUS2Q9NX74 493 aaKnown RBP18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 GDE1Q9NZC3 331 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 ZNF180Q9UJW8 692 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 CLEC4EQ9ULY5 219 aa18.94■□□□□ 0.62
TNFSF9-201ENST00000245817 LOC285095A0A1B0GVY8 99 aa18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 HEATR9A2RTY3 570 aa18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 KRT37O76014 449 aa18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 PAMP19021 973 aa18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 CA4P22748 312 aa18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 CHRNA4P43681 627 aa18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 FRG1Q14331 258 aaKnown RBP18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 NPAS3Q8IXF0 933 aa18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 FGF13Q92913 245 aa18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 SMARCD2Q92925 531 aa18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 SMC6Q96SB8 1091 aa18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 GAS2L1Q99501 681 aaPredicted RBP18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 MRM3Q9HC36 420 aaKnown RBP18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 KCNK9Q9NPC2 374 aa18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 ZFATQ9P243 1243 aa18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 ARIH1Q9Y4X5 557 aaPredicted RBP18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 DOCK6Q96HP0 2047 aa18.93■□□□□ 0.62
TNFSF9-201ENST00000245817 CXorf49A8MYA2 514 aaPredicted RBP18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 KRT38O76015 456 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 FGF1P05230 155 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 BRAFP15056 766 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 HOXB8P17481 243 aaPredicted RBP18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 SERPINB9P50453 376 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 LAMB3Q13751 1172 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 PITRM1Q5JRX3 1037 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 RALGPS1Q5JS13 557 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 FAM78AQ5JUQ0 283 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 TRABD2AQ86V40 505 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 RNF135Q8IUD6 432 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 BPIFB1Q8TDL5 484 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 MFSD3Q96ES6 412 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 FCRL3Q96P31 734 aaPredicted RBP18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 C20orf96Q9NUD7 363 aaPredicted RBP18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 FCF1Q9Y324 198 aaKnown RBP18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 TCAF1Q9Y4C2 921 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 HELZP42694 1942 aaKnown RBP18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 CXorf51AA0A1B0GTR3 108 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 GJB3O75712 270 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 GLP2RO95838 553 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 CD160O95971 181 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 MT-ND3P03897 115 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 CR2P20023 1033 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 VIPR2P41587 438 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 RGRP47804 291 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 SIRPB2Q5JXA9 342 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 ATAT1Q5SQI0 421 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 CES5AQ6NT32 575 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 Q7L0L9 218 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 OSCP1Q8WVF1 389 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 ASB16Q96NS5 453 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 SLC2A11Q9BYW1 496 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 TRABDQ9H4I3 376 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 SMYD2Q9NRG4 433 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 THG1LQ9NWX6 298 aaKnown RBP18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 MARK1Q9P0L2 795 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 SLC25A13Q9UJS0 675 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 GGA2Q9UJY4 613 aa18.92■□□□□ 0.62
TNFSF9-201ENST00000245817 NOTCH4Q99466 2003 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 CHD5Q8TDI0 1954 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 PRRC2BQ5JSZ5 2229 aaKnown RBP18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 ZCWPW2A0A1B0GU75 182 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 LINC01565O15544 149 aa18.91■□□□□ 0.62
TNFSF9-201ENST00000245817 NDST3O95803 873 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms