RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SLC1A2P43004 574 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 TWF1Q12792 350 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 TAF12Q16514 161 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 SIRPB2Q5JXA9 342 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 TSTD2Q5T7W7 516 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 TMEM150AQ86TG1 271 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 CRLF3Q8IUI8 442 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 MFSD6LQ8IWD5 586 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 CMTR2Q8IYT2 770 aaKnown RBP18.68■□□□□ 0.58
HOXC11-201ENST00000243082 TNS4Q8IZW8 715 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 C2CD4AQ8NCU7 369 aaPredicted RBP18.68■□□□□ 0.58
HOXC11-201ENST00000243082 PPP1R14CQ8TAE6 165 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 SKA1Q96BD8 255 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 TRIM43Q96BQ3 446 aaPredicted RBP18.68■□□□□ 0.58
HOXC11-201ENST00000243082 KCNK4Q9NYG8 393 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 AGO1Q9UL18 857 aaKnown RBP18.68■□□□□ 0.58
HOXC11-201ENST00000243082 ACTL7AQ9Y615 435 aa18.68■□□□□ 0.58
HOXC11-201ENST00000243082 DNAJC6O75061 913 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 ATP5HO75947 161 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 TIMP1P01033 207 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 SERPINE1P05121 402 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 URODP06132 367 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 CPA3P15088 417 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 TARSP26639 723 aaKnown RBP18.67■□□□□ 0.58
HOXC11-201ENST00000243082 SERPINB3P29508 390 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 PGGT1BP53609 377 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 ELF3P78545 371 aaPredicted RBP18.67■□□□□ 0.58
HOXC11-201ENST00000243082 THOC5Q13769 683 aaKnown RBP18.67■□□□□ 0.58
HOXC11-201ENST00000243082 ZNF235Q14590 738 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 USP10Q14694 798 aaKnown RBP18.67■□□□□ 0.58
HOXC11-201ENST00000243082 VEPH1Q14D04 833 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 CYB5D1Q6P9G0 228 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 ATG14Q6ZNE5 492 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 DNAJB7Q7Z6W7 309 aaPredicted RBP18.67■□□□□ 0.58
HOXC11-201ENST00000243082 KIF2BQ8N4N8 673 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 OR6Y1Q8NGX8 325 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 C1QTNF1Q9BXJ1 281 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 KLC4Q9NSK0 619 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 MROH6A6NGR9 719 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 PRRG1O14668 218 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 CLDN11O75508 207 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 LYPLA1O75608 230 aaPredicted RBP18.67■□□□□ 0.58
HOXC11-201ENST00000243082 PAPSS2O95340 614 aaPredicted RBP18.67■□□□□ 0.58
HOXC11-201ENST00000243082 HNRNPH1P31943 449 aaKnown RBP18.67■□□□□ 0.58
HOXC11-201ENST00000243082 SLC1A6P48664 564 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 CDK18Q07002 472 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 ADGRF1Q5T601 910 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 ALG1LQ6GMV1 187 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 NEPROQ6NW34 567 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 TCEAL8Q8IYN2 117 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 OR13J1Q8NGT2 312 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 PAWRQ96IZ0 340 aaKnown RBP18.67■□□□□ 0.58
HOXC11-201ENST00000243082 FAM167BQ9BTA0 163 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 FBXO6Q9NRD1 293 aaPredicted RBP18.67■□□□□ 0.58
HOXC11-201ENST00000243082 MARCOQ9UEW3 520 aaPredicted RBP18.67■□□□□ 0.58
HOXC11-201ENST00000243082 HAO1Q9UJM8 370 aa18.67■□□□□ 0.58
HOXC11-201ENST00000243082 G3V2L1 256 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 KITP10721 976 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 IRF1P10914 325 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 SAT1P21673 171 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 PPP3CCP48454 512 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 POLD2P49005 469 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 IL31Q6EBC2 164 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 ZNF470Q6ECI4 717 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 CCDC91Q7Z6B0 441 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 SLC41A1Q8IVJ1 513 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 NMRAL1Q9HBL8 299 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 FBXO5Q9UKT4 447 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 ANKRD6Q9Y2G4 727 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 PHGDHO43175 533 aaKnown RBP18.66■□□□□ 0.58
HOXC11-201ENST00000243082 KDELR3O43731 214 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 HAUS5O94927 633 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 CBX6O95503 412 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 SLC35E2BP0CK96 405 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 RALBP11234 206 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 GLDCP23378 1020 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 GRK2P25098 689 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 ARRB2P32121 409 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 ELF1P32519 619 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 RAPH1Q70E73 1250 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 PRR11Q96HE9 360 aaPredicted RBP18.66■□□□□ 0.58
HOXC11-201ENST00000243082 ZFRQ96KR1 1074 aaKnown RBP18.66■□□□□ 0.58
HOXC11-201ENST00000243082 SPON2Q9BUD6 331 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 C11orf49Q9H6J7 331 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 SAR1AQ9NR31 198 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 TLK1Q9UKI8 766 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 INSL5Q9Y5Q6 135 aa18.66■□□□□ 0.58
HOXC11-201ENST00000243082 ANAPC1Q9H1A4 1944 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 FAM95CA0A1B0GW59 222 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 ILVBLA1L0T0 632 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 AURKAO14965 403 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 MGRN1O60291 552 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 TSPAN3O60637 253 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 ACRP10323 421 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 AVPR1AP37288 418 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 GJA8P48165 433 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 ITGA9Q13797 1035 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 CHST9Q7L1S5 443 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 CEP97Q8IW35 865 aa18.65■□□□□ 0.58
HOXC11-201ENST00000243082 TMEM151AQ8N4L1 468 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms