RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 CCNIQ14094 377 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 MARC1Q5VT66 337 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 PTRHD1Q6GMV3 140 aaKnown RBP11.12□□□□□ -0.63
CCDC170-201ENST00000239374 COX4I2Q96KJ9 171 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 PRDM16Q9HAZ2 1276 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 ENTPD7Q9NQZ7 604 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 ARF4P18085 180 aaPredicted RBP11.12□□□□□ -0.63
CCDC170-201ENST00000239374 ZNF460Q14592 562 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 PCLAFQ15004 111 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 HSDL1Q3SXM5 330 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 LDLRAP1Q5SW96 308 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 FASTKD5Q7L8L6 764 aaKnown RBP11.12□□□□□ -0.63
CCDC170-201ENST00000239374 TBCDQ9BTW9 1192 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 EIF3LQ9Y262 564 aaKnown RBP11.12□□□□□ -0.63
CCDC170-201ENST00000239374 PSAT1Q9Y617 370 aa11.12□□□□□ -0.63
CCDC170-201ENST00000239374 NUP98P52948 1817 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 A0A0J9YYE9 177 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 VPS26AO75436 327 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 ZBTB11O95625 1053 aaPredicted RBP11.11□□□□□ -0.63
CCDC170-201ENST00000239374 FGF3P11487 239 aaPredicted RBP11.11□□□□□ -0.63
CCDC170-201ENST00000239374 TLR1Q15399 786 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 OR9Q1Q8NGQ5 310 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 RPRD1AQ96P16 312 aaPredicted RBP11.11□□□□□ -0.63
CCDC170-201ENST00000239374 KCNK13Q9HB14 408 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 MAFBQ9Y5Q3 323 aaPredicted RBP11.11□□□□□ -0.63
CCDC170-201ENST00000239374 CLDN5O00501 218 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 ARHGEF9O43307 516 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 HOXC6P09630 235 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 ADSLP30566 484 aaPredicted RBP11.11□□□□□ -0.63
CCDC170-201ENST00000239374 CDK18Q07002 472 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 BNIP2Q12982 314 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 STRADAQ7RTN6 431 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 ADGRG6Q86SQ4 1221 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 MIB1Q86YT6 1006 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 ERI1Q8IV48 349 aaKnown RBP11.11□□□□□ -0.63
CCDC170-201ENST00000239374 OR7A2PQ8NGA2 310 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 VPS33AQ96AX1 596 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 PEBP4Q96S96 227 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 OLA1Q9NTK5 396 aaKnown RBP11.11□□□□□ -0.63
CCDC170-201ENST00000239374 SF3B1O75533 1304 aaKnown RBP eCLIP11.11□□□□□ -0.63
CCDC170-201ENST00000239374 RGS5O15539 181 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 ETV4P43268 484 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 MPP1Q00013 466 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 TNK2Q07912 1038 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 ZNF252P-AS1Q0IIN9 211 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 SNX17Q15036 470 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 CCDC85BQ15834 202 aaPredicted RBP11.11□□□□□ -0.63
CCDC170-201ENST00000239374 SLC25A52Q3SY17 297 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 NIFKQ9BYG3 293 aaKnown RBP11.11□□□□□ -0.63
CCDC170-201ENST00000239374 NUDT5Q9UKK9 219 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 FAM50BQ9Y247 325 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 ASB3Q9Y575 518 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 RRN3P2A6NIE6 340 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 STX7O15400 261 aaKnown RBP11.11□□□□□ -0.63
CCDC170-201ENST00000239374 KATNA1O75449 491 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 AP2A1O95782 977 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 NPR3P17342 541 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 CCT8P50990 548 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 SPIDRQ14159 915 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 TTC23Q5W5X9 447 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 REP15Q6BDI9 236 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 CLEC6AQ6EIG7 209 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 BBS2Q9BXC9 721 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 NDEL1Q9GZM8 345 aa11.11□□□□□ -0.63
CCDC170-201ENST00000239374 DNAJA2O60884 412 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 NR4A1P22736 598 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 MRPS5P82675 430 aaKnown RBP11.1□□□□□ -0.63
CCDC170-201ENST00000239374 TWF1Q12792 350 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 DGUOKQ16854 277 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 VPS26BQ4G0F5 336 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 TMEM192Q8IY95 271 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 EID3Q8N140 333 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 PARP8Q8N3A8 854 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 ATG16L2Q8NAA4 619 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 FAM120BQ96EK7 910 aaKnown RBP11.1□□□□□ -0.63
CCDC170-201ENST00000239374 ABHD8Q96I13 439 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 ADI1Q9BV57 179 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 C6orf62Q9GZU0 229 aaPredicted RBP11.1□□□□□ -0.63
CCDC170-201ENST00000239374 POLG2Q9UHN1 485 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 WDR47O94967 919 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 LINC00032P0C843 101 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 SLC2A3P11169 496 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 SLC2A4P14672 509 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 NMBRP28336 390 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 GSSP48637 474 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 PPIL2Q13356 520 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 TEX44Q53QW1 395 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 CELF3Q5SZQ8 465 aaKnown RBP11.1□□□□□ -0.63
CCDC170-201ENST00000239374 CACHD1Q5VU97 1274 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 SPESP1Q6UW49 350 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 CATSPERGQ6ZRH7 1159 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 SLC26A9Q7LBE3 791 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 OTOP3Q7RTS5 596 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 TAS1R3Q7RTX0 852 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 CLYBLQ8N0X4 340 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 METTL6Q8TCB7 284 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 ERLEC1Q96DZ1 483 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 TRIM54Q9BYV2 358 aa11.1□□□□□ -0.63
CCDC170-201ENST00000239374 SORBS2O94875 1100 aaKnown RBP11.1□□□□□ -0.63
CCDC170-201ENST00000239374 ZBTB7AO95365 584 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms