RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 UNC5CO95185 931 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 KLKB1P03952 638 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 APOA4P06727 396 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 HLA-DPA1P20036 260 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 HOXD9P28356 352 aaPredicted RBP23.51■■□□□ 1.35
MSX2-201ENST00000239243 PCLAFQ15004 111 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 MBLAC2Q68D91 279 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 ARMC5Q96C12 935 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 SIKE1Q9BRV8 207 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 TMEM120AQ9BXJ8 343 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 RNF38Q9H0F5 515 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 GKN1Q9NS71 199 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 KCNK4Q9NYG8 393 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 SLC2A6Q9UGQ3 507 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 ZFP69BQ9UJL9 534 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 SSX2IPQ9Y2D8 614 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 A0A0D9SEW6 157 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 AHSGP02765 367 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 RHOCP08134 193 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 OXCT1P55809 520 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 RPS24P62847 133 aaKnown RBP23.51■■□□□ 1.35
MSX2-201ENST00000239243 PABPC1LQ4VXU2 614 aaKnown RBP23.51■■□□□ 1.35
MSX2-201ENST00000239243 RAPH1Q70E73 1250 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 C2CD4AQ8NCU7 369 aaPredicted RBP23.51■■□□□ 1.35
MSX2-201ENST00000239243 CAB39LQ9H9S4 337 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 SLC40A1Q9NP59 571 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 AGO1Q9UL18 857 aaKnown RBP23.51■■□□□ 1.35
MSX2-201ENST00000239243 PCDHB12Q9Y5F1 795 aa23.51■■□□□ 1.35
MSX2-201ENST00000239243 KDELR3O43731 214 aa23.5■■□□□ 1.35
MSX2-201ENST00000239243 SERPINE1P05121 402 aa23.5■■□□□ 1.35
MSX2-201ENST00000239243 FGF1P05230 155 aa23.5■■□□□ 1.35
MSX2-201ENST00000239243 SERPINF2P08697 491 aa23.5■■□□□ 1.35
MSX2-201ENST00000239243 CSRP3P50461 194 aa23.5■■□□□ 1.35
MSX2-201ENST00000239243 USP10Q14694 798 aaKnown RBP23.5■■□□□ 1.35
MSX2-201ENST00000239243 SIRPB2Q5JXA9 342 aa23.5■■□□□ 1.35
MSX2-201ENST00000239243 KCNK13Q9HB14 408 aa23.5■■□□□ 1.35
MSX2-201ENST00000239243 UBA2Q9UBT2 640 aaPredicted RBP23.5■■□□□ 1.35
MSX2-201ENST00000239243 STOML2Q9UJZ1 356 aa23.5■■□□□ 1.35
MSX2-201ENST00000239243 C2orf78A6NCI8 922 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 TRIM43BA6NCK2 446 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 FGF3P11487 239 aaPredicted RBP23.49■■□□□ 1.35
MSX2-201ENST00000239243 COL6A2P12110 1019 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 CPA3P15088 417 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 ITGB8P26012 769 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 ZNF470Q6ECI4 717 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 NEPROQ6NW34 567 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 OR7D4Q8NG98 312 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 PEX13Q92968 403 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 TRIM43Q96BQ3 446 aaPredicted RBP23.49■■□□□ 1.35
MSX2-201ENST00000239243 KLHL29Q96CT2 875 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 PSKH2Q96QS6 385 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 MGME1Q9BQP7 344 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 RASSF9O75901 435 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 PRKCGP05129 697 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 IRF1P10914 325 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 MBL2P11226 248 aaPredicted RBP23.49■■□□□ 1.35
MSX2-201ENST00000239243 SLC1A2P43004 574 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 ABCG1P45844 678 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 CD151P48509 253 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 CTBP1Q13363 440 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 MSLNQ13421 630 aaPredicted RBP23.49■■□□□ 1.35
MSX2-201ENST00000239243 SLC12A1Q13621 1099 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 DENND6AQ8IWF6 608 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 LMNTD2Q8IXW0 634 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 SPON2Q9BUD6 331 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 CINPQ9BW66 212 aaPredicted RBP23.49■■□□□ 1.35
MSX2-201ENST00000239243 TBC1D30Q9Y2I9 924 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 ASB3Q9Y575 518 aa23.49■■□□□ 1.35
MSX2-201ENST00000239243 DNAJC6O75061 913 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 ATXN1LP0C7T5 689 aaKnown RBP23.48■■□□□ 1.35
MSX2-201ENST00000239243 KCNA4P22459 653 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 ILF2Q12905 390 aaKnown RBP23.48■■□□□ 1.35
MSX2-201ENST00000239243 MTDHQ86UE4 582 aaKnown RBP23.48■■□□□ 1.35
MSX2-201ENST00000239243 ARID3BQ8IVW6 561 aaPredicted RBP23.48■■□□□ 1.35
MSX2-201ENST00000239243 NMRAL1Q9HBL8 299 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 SAR1AQ9NR31 198 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 HEY2Q9UBP5 337 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 FBXO5Q9UKT4 447 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 ANAPC1Q9H1A4 1944 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 MROH6A6NGR9 719 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 TEX28O15482 410 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 SLC7A4O43246 635 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 ATP5BP06576 529 aaKnown RBP23.48■■□□□ 1.35
MSX2-201ENST00000239243 MYL2P10916 166 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 CES1P23141 567 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 GABRB3P28472 473 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 RASSF2P50749 326 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 DLG2Q15700 870 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 FBXW10Q5XX13 1052 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 ZNF783Q6ZMS7 281 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 ZCCHC23Q6ZST2 131 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 GALNT7Q86SF2 657 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 C10orf107Q8IVU9 208 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 PLD6Q8N2A8 252 aaKnown RBP23.48■■□□□ 1.35
MSX2-201ENST00000239243 RDH11Q8TC12 318 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 PPP4R1Q8TF05 950 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 AUTS2Q8WXX7 1259 aa23.48■■□□□ 1.35
MSX2-201ENST00000239243 MUSKO15146 869 aa23.47■■□□□ 1.35
MSX2-201ENST00000239243 HNRNPCL1O60812 293 aaKnown RBP23.47■■□□□ 1.35
MSX2-201ENST00000239243 RALBP11234 206 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms