RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 USB1Q9BQ65 265 aaKnown RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 SPATA9Q9BWV2 254 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 REEP1Q9H902 201 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 IKZF3Q9UKT9 509 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 PTPRKQ15262 1439 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 GYPCP04921 128 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 ACRP10323 421 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 ACADLP28330 430 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 CD3EAPO15446 510 aaKnown RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 PSMD8P48556 350 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 GLT6D1Q7Z4J2 308 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 CDCA5Q96FF9 252 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 DNAAF2Q9NVR5 837 aaKnown RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 CLN6Q9NWW5 311 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 CLDND1Q9NY35 253 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 GRHL1Q9NZI5 618 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 ENOPH1Q9UHY7 261 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 SNX7Q9UNH6 387 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 WDR37Q9Y2I8 494 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 M0R036 132 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 ITGALP20701 1170 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 OR5M3Q8NGP4 307 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 PNPT1Q8TCS8 783 aaKnown RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 SYT15Q9BQS2 421 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 MND1Q9BWT6 205 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 CLK4Q9HAZ1 481 aaKnown RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 NCKIPSDQ9NZQ3 722 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 ZNF536O15090 1300 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 MATN4O95460 622 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 RARGP13631 454 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 CSHL1Q14406 222 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 ARHGAP36Q6ZRI8 547 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 SFRP1Q8N474 314 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 FNDC5Q8NAU1 212 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 NAT14Q8WUY8 206 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 ZNF350Q9GZX5 532 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 ERGIC3Q9Y282 383 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 C2orf74A8MZ97 194 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 TEX46H3BTG2 121 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 PGRMC2O15173 223 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 ETS1P14921 441 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 MYL9P24844 172 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 PPP2R1BP30154 601 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 RPP38P78345 283 aaKnown RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 OC90Q02509 493 aaPredicted RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 TOB2Q14106 344 aaPredicted RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 TRAPPC11Q7Z392 1133 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 ADGRG6Q86SQ4 1221 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 METTL16Q86W50 562 aaKnown RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 C11orf24Q96F05 449 aaPredicted RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 TARS2Q9BW92 718 aaKnown RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 MOV10Q9HCE1 1003 aaKnown RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 EXD2Q9NVH0 621 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 CDH7Q9ULB5 785 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 UBQLN1Q9UMX0 589 aaKnown RBP11.2□□□□□ -0.62
MSH6-201ENST00000234420 ADGBQ8N7X0 1667 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 MYH7P12883 1935 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 IQSEC2Q5JU85 1478 aa11.2□□□□□ -0.62
MSH6-201ENST00000234420 MANSC4A6NHS7 340 aaPredicted RBP11.19□□□□□ -0.62
MSH6-201ENST00000234420 hCG_1984214I3L0E3 225 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 MID1O15344 667 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 CCNB2O95067 398 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 DNTTP04053 509 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 PSME3P61289 254 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 MFSD10Q14728 455 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 SNRNP35Q16560 246 aaKnown RBP11.19□□□□□ -0.62
MSH6-201ENST00000234420 ADHFE1Q8IWW8 467 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 ZNF713Q8N859 430 aaPredicted RBP11.19□□□□□ -0.62
MSH6-201ENST00000234420 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.19□□□□□ -0.622e-7■■■■□ 21.4
MSH6-201ENST00000234420 MORF4L1Q9UBU8 362 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 COG5Q9UP83 839 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 DUSP10Q9Y6W6 482 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 PIK3C2GO75747 1445 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 CHD1O14646 1710 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 PRAMEF33A0A0G2JMD5 474 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 PRAMEF10O60809 474 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 OR5F1O95221 314 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 GJA1P17302 382 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 BDNFP23560 247 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 PPM1AP35813 382 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 ADGRG2Q8IZP9 1017 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 TCP10LQ8TDR4 215 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 MYDGFQ969H8 173 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 ITFG2Q969R8 447 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 EMID1Q96A84 441 aaPredicted RBP11.19□□□□□ -0.62
MSH6-201ENST00000234420 ASAH2Q9NR71 780 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 SNCAIPQ9Y6H5 919 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 EIF3DO15371 548 aaKnown RBP eCLIP11.19□□□□□ -0.62
MSH6-201ENST00000234420 TBL1XO60907 577 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 IL18RAPO95256 599 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 FAM153BP0C7A2 387 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 RPS2P15880 293 aaKnown RBP11.19□□□□□ -0.62
MSH6-201ENST00000234420 GPD1P21695 349 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 CAPGP40121 348 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 PDK1Q15118 436 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 ZNF280DQ6N043 979 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 ZCCHC23Q6ZST2 131 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 TMEM159Q96B96 161 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 PHF20Q9BVI0 1012 aa11.19□□□□□ -0.62
MSH6-201ENST00000234420 ATP10BO94823 1461 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms