RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 CRLS1Q9UJA2 301 aa13.88□□□□□ -0.19
NFKB1-201ENST00000226574 BCLAF3A2AJT9 711 aaKnown RBP13.88□□□□□ -0.19
NFKB1-201ENST00000226574 NRP2O60462 931 aa13.88□□□□□ -0.19
NFKB1-201ENST00000226574 ODC1P11926 461 aa13.88□□□□□ -0.19
NFKB1-201ENST00000226574 PPP3CCP48454 512 aa13.88□□□□□ -0.19
NFKB1-201ENST00000226574 FKBP1AP62942 108 aaKnown RBP13.88□□□□□ -0.19
NFKB1-201ENST00000226574 HGH1Q9BTY7 390 aa13.88□□□□□ -0.19
NFKB1-201ENST00000226574 SPATA16Q9BXB7 569 aa13.88□□□□□ -0.19
NFKB1-201ENST00000226574 RSL24D1Q9UHA3 163 aaKnown RBP13.88□□□□□ -0.19
NFKB1-201ENST00000226574 ZNHIT2Q9UHR6 403 aa13.88□□□□□ -0.19
NFKB1-201ENST00000226574 RAMP2O60895 175 aa13.88□□□□□ -0.19
NFKB1-201ENST00000226574 HLA-DPA1P20036 260 aa13.88□□□□□ -0.19
NFKB1-201ENST00000226574 MRPS5P82675 430 aaKnown RBP13.88□□□□□ -0.19
NFKB1-201ENST00000226574 SLC25A11Q02978 314 aaKnown RBP13.88□□□□□ -0.19
NFKB1-201ENST00000226574 CBR4Q8N4T8 237 aa13.88□□□□□ -0.19
NFKB1-201ENST00000226574 BDH2Q9BUT1 245 aa13.88□□□□□ -0.19
NFKB1-201ENST00000226574 MAFBQ9Y5Q3 323 aaPredicted RBP13.88□□□□□ -0.19
NFKB1-201ENST00000226574 RGPD5Q99666 1765 aa13.88□□□□□ -0.19
NFKB1-201ENST00000226574 C5P01031 1676 aa13.88□□□□□ -0.19
NFKB1-201ENST00000226574 DHRS12A0PJE2 317 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 C2orf81A6NN90 581 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 PDLIM1O00151 329 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 GRIN3BO60391 1043 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 TRMUO75648 421 aaKnown RBP13.87□□□□□ -0.19
NFKB1-201ENST00000226574 LTA4HP09960 611 aaKnown RBP13.87□□□□□ -0.19
NFKB1-201ENST00000226574 ATP6V1E1P36543 226 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 TAS2R39P59534 338 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 NUMA1Q14980 2115 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 SYPL2Q5VXT5 272 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 IL27RAQ6UWB1 636 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 TTC30AQ86WT1 665 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 PNPLA1Q8N8W4 532 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 DENND1AQ8TEH3 1009 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 PPM1MQ96MI6 270 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 ZMAT2Q96NC0 199 aaKnown RBP13.87□□□□□ -0.19
NFKB1-201ENST00000226574 RTKNQ9BST9 563 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 TRIM62Q9BVG3 475 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 FTHL17Q9BXU8 183 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 COQ10BQ9H8M1 238 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 ACTR8Q9H981 624 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 TRAF6Q9Y4K3 522 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 C17orf102A2RUQ5 167 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 SERPIND1P05546 499 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 SLC2A3P11169 496 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 S100A5P33763 92 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 NEK2P51955 445 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 WNT3AP56704 352 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 GPR158Q5T848 1215 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 CUZD1Q86UP6 607 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 SLC22A9Q8IVM8 553 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 CENPLQ8N0S6 344 aaPredicted RBP13.87□□□□□ -0.19
NFKB1-201ENST00000226574 ELMO1Q92556 727 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 FAM120BQ96EK7 910 aaKnown RBP13.87□□□□□ -0.19
NFKB1-201ENST00000226574 FBXO21O94952 628 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 KRT8P05787 483 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 SERPINF2P08697 491 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 HDCP19113 662 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 BRCC3P46736 316 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 RGS4P49798 205 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 SERPINH1P50454 418 aaKnown RBP13.87□□□□□ -0.19
NFKB1-201ENST00000226574 RPS6KA3P51812 740 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 SLC25A52Q3SY17 297 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 TEX44Q53QW1 395 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 NT5DC4Q86YG4 428 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 ZDHHC13Q8IUH4 622 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 WDTC1Q8N5D0 677 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 ITFG1Q8TB96 612 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 RHOJQ9H4E5 214 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 LRRC37A3O60309 1634 aa13.87□□□□□ -0.19
NFKB1-201ENST00000226574 MDM4O15151 490 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 NCK1P16333 377 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 LHX1P48742 406 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 CDC42EP1Q00587 391 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 ASRGL1Q7L266 308 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 PLD6Q8N2A8 252 aaKnown RBP13.86□□□□□ -0.19
NFKB1-201ENST00000226574 OR9I1Q8NGQ6 314 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 DLG3Q92796 817 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 RIBC2Q9H4K1 309 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 RBMX2Q9Y388 322 aaKnown RBP13.86□□□□□ -0.19
NFKB1-201ENST00000226574 NTRK1P04629 796 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 CES1P23141 567 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 NADK2Q4G0N4 442 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 UTP15Q8TED0 518 aaKnown RBP13.86□□□□□ -0.19
NFKB1-201ENST00000226574 SEMA3CQ99985 751 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 ATXN10Q9UBB4 475 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 SPASTQ9UBP0 616 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 SOWAHBA6NEL2 793 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 RNASEH1O60930 286 aaKnown RBP13.86□□□□□ -0.19
NFKB1-201ENST00000226574 CLIC3O95833 236 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 ABCB1P08183 1280 aaPredicted RBP13.86□□□□□ -0.19
NFKB1-201ENST00000226574 ADSLP30566 484 aaPredicted RBP13.86□□□□□ -0.19
NFKB1-201ENST00000226574 RAP1GAP2Q684P5 730 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 TIGD7Q6NT04 549 aaPredicted RBP13.86□□□□□ -0.19
NFKB1-201ENST00000226574 PAOXQ6QHF9 649 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 RIOX2Q8IUF8 465 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 FCRL2Q96LA5 508 aaPredicted RBP13.86□□□□□ -0.19
NFKB1-201ENST00000226574 OXCT2Q9BYC2 517 aaPredicted RBP13.86□□□□□ -0.19
NFKB1-201ENST00000226574 PDZD7Q9H5P4 517 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 SYTL2Q9HCH5 934 aa13.86□□□□□ -0.19
NFKB1-201ENST00000226574 TAS2R13Q9NYV9 303 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms