RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 OMDQ99983 421 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 TBC1D10AQ9BXI6 508 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 UGT2B28Q9BY64 529 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 NDEL1Q9GZM8 345 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 ZDHHC18Q9NUE0 388 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 GRHL1Q9NZI5 618 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 TAF1P21675 1872 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 SMIM35A0A1B0GVV1 85 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 CARNS1A5YM72 827 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 PEX11AO75192 247 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 PRKAR2AP13861 404 aaKnown RBP11.62□□□□□ -0.55
NOD1-201ENST00000222823 TTPAP49638 278 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 FKBP1BP68106 108 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 JAG1P78504 1218 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 DDR2Q16832 855 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 CCDC149Q6ZUS6 474 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 CHMP1BQ7LBR1 199 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 KCTD4Q8WVF5 259 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 RMND5BQ96G75 393 aaPredicted RBP11.62□□□□□ -0.55
NOD1-201ENST00000222823 EXOC2Q96KP1 924 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 PRRG3Q9BZD7 231 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 RNPEPL1Q9HAU8 725 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 GOLGA2P5Q9HBQ8 144 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 BTBD7Q9P203 1132 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 TBC1D3BA6NDS4 549 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 FAM220BPB1ANY3 271 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 PRR23D1E9PI22 279 aaPredicted RBP11.62□□□□□ -0.55
NOD1-201ENST00000222823 ATG7O95352 703 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 C4BPAP04003 597 aaKnown RBP11.62□□□□□ -0.55
NOD1-201ENST00000222823 PRR23D2P0DMB1 279 aaPredicted RBP11.62□□□□□ -0.55
NOD1-201ENST00000222823 ABL2P42684 1182 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 GRIA4P48058 902 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 ELF3P78545 371 aaPredicted RBP11.62□□□□□ -0.55
NOD1-201ENST00000222823 PTP4A2Q12974 167 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 NCF4Q15080 339 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 DCAF12L1Q5VU92 463 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 RNF43Q68DV7 783 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 TTC7BQ86TV6 843 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 DHRSXQ8N5I4 330 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 NDNQ99608 321 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 TBCDQ9BTW9 1192 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 ZDHHC6Q9H6R6 413 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 R3HDM2Q9Y2K5 976 aaKnown RBP11.62□□□□□ -0.55
NOD1-201ENST00000222823 DERAQ9Y315 318 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 HSMCR30P0CW71 290 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 WNT3AP56704 352 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 RAB10P61026 200 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 SLC25A3Q00325 362 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 CDK18Q07002 472 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 NOMO1Q15155 1222 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 FAM110CQ1W6H9 321 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 BRMS1LQ5PSV4 323 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 TMEM26Q6ZUK4 368 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 ZNF438Q7Z4V0 828 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 ZDHHC13Q8IUH4 622 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 SYT12Q8IV01 421 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 TMEM132CQ8N3T6 1108 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 ITFG1Q8TB96 612 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 PYDC1Q8WXC3 89 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 KRCC1Q9NPI7 259 aaPredicted RBP11.62□□□□□ -0.55
NOD1-201ENST00000222823 STK39Q9UEW8 545 aa11.62□□□□□ -0.55
NOD1-201ENST00000222823 RPN2P04844 631 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 ADSSP30520 456 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 USP41Q3LFD5 358 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 TSHZ1Q6ZSZ6 1077 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 TNS4Q8IZW8 715 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 ACTRT2Q8TDY3 377 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 XPR1Q9UBH6 696 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 RABGEF1Q9UJ41 708 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 SLC9A3R1O14745 358 aaPredicted RBP11.61□□□□□ -0.55
NOD1-201ENST00000222823 DHX15O43143 795 aaKnown RBP11.61□□□□□ -0.55
NOD1-201ENST00000222823 CILPO75339 1184 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 LRCH4O75427 683 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 CYP7B1O75881 506 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 KRT20P35900 424 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 FLT3LGP49771 235 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 HIRAP54198 1017 aaPredicted RBP11.61□□□□□ -0.55
NOD1-201ENST00000222823 FNDC3BQ53EP0 1204 aaKnown RBP11.61□□□□□ -0.55
NOD1-201ENST00000222823 FAM228AQ86W67 206 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 FNIP1Q8TF40 1166 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 HDAC10Q969S8 669 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 REPS1Q96D71 796 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 TSPAN18Q96SJ8 248 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 ZNF184Q99676 751 aaPredicted RBP11.61□□□□□ -0.55
NOD1-201ENST00000222823 NIFKQ9BYG3 293 aaKnown RBP11.61□□□□□ -0.55
NOD1-201ENST00000222823 LRRC4CQ9HCJ2 640 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 VPS45Q9NRW7 570 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 INVSQ9Y283 1065 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 RPTORQ8N122 1335 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 A0A1W2PPM1 405 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 PSMB9P28065 219 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 C1DQ13901 141 aaKnown RBP11.61□□□□□ -0.55
NOD1-201ENST00000222823 ATAD3BQ5T9A4 648 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 DOK6Q6PKX4 331 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 ZDHHC24Q6UX98 284 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 C1orf127Q8N9H9 656 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 WDR48Q8TAF3 677 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 GRIN3AQ8TCU5 1115 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 RSPH1Q8WYR4 309 aa11.61□□□□□ -0.55
NOD1-201ENST00000222823 MRPL57Q9BQC6 102 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms