RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 CFLARO15519 480 aa15.47■□□□□ 0.07
TGFB1-201ENST00000221930 GRID2O43424 1007 aa15.47■□□□□ 0.07
TGFB1-201ENST00000221930 CLPPQ16740 277 aaPredicted RBP15.47■□□□□ 0.07
TGFB1-201ENST00000221930 TIGD5Q53EQ6 642 aa15.47■□□□□ 0.07
TGFB1-201ENST00000221930 METTL21CQ5VZV1 264 aa15.47■□□□□ 0.07
TGFB1-201ENST00000221930 ZYG11AQ6WRX3 759 aa15.47■□□□□ 0.07
TGFB1-201ENST00000221930 ZNF554Q86TJ5 538 aa15.47■□□□□ 0.07
TGFB1-201ENST00000221930 KBTBD6Q86V97 674 aa15.47■□□□□ 0.07
TGFB1-201ENST00000221930 NXNL1Q96CM4 212 aa15.47■□□□□ 0.07
TGFB1-201ENST00000221930 TSNARE1Q96NA8 513 aa15.47■□□□□ 0.07
TGFB1-201ENST00000221930 SPATA16Q9BXB7 569 aa15.47■□□□□ 0.07
TGFB1-201ENST00000221930 DLX3O60479 287 aa15.46■□□□□ 0.07
TGFB1-201ENST00000221930 PMPCBO75439 489 aa15.46■□□□□ 0.07
TGFB1-201ENST00000221930 PKNOX1P55347 436 aa15.46■□□□□ 0.07
TGFB1-201ENST00000221930 FRG1Q14331 258 aaKnown RBP15.46■□□□□ 0.07
TGFB1-201ENST00000221930 GRAMD1BQ3KR37 738 aa15.46■□□□□ 0.07
TGFB1-201ENST00000221930 INTS6LQ5JSJ4 861 aaKnown RBP15.46■□□□□ 0.07
TGFB1-201ENST00000221930 CST9Q5W186 159 aa15.46■□□□□ 0.07
TGFB1-201ENST00000221930 PM20D1Q6GTS8 502 aa15.46■□□□□ 0.07
TGFB1-201ENST00000221930 ZNF280DQ6N043 979 aa15.46■□□□□ 0.07
TGFB1-201ENST00000221930 DQX1Q8TE96 717 aaKnown RBP15.46■□□□□ 0.07
TGFB1-201ENST00000221930 JADE3Q92613 823 aa15.46■□□□□ 0.07
TGFB1-201ENST00000221930 USP13Q92995 863 aaPredicted RBP15.46■□□□□ 0.07
TGFB1-201ENST00000221930 CDRT15Q96T59 188 aa15.46■□□□□ 0.07
TGFB1-201ENST00000221930 RRAGCQ9HB90 399 aa15.46■□□□□ 0.07
TGFB1-201ENST00000221930 FAM105AQ9NUU6 356 aa15.46■□□□□ 0.07
TGFB1-201ENST00000221930 ST3GAL5Q9UNP4 418 aa15.46■□□□□ 0.07
TGFB1-201ENST00000221930 HTTP42858 3142 aa15.46■□□□□ 0.07
TGFB1-201ENST00000221930 CASP8AP2Q9UKL3 1982 aa15.46■□□□□ 0.07
TGFB1-201ENST00000221930 ARL5CA6NH57 179 aa15.46■□□□□ 0.06
TGFB1-201ENST00000221930 PGK1P00558 417 aa15.46■□□□□ 0.06
TGFB1-201ENST00000221930 PGFP49763 221 aa15.46■□□□□ 0.06
TGFB1-201ENST00000221930 CNGA3Q16281 694 aa15.46■□□□□ 0.06
TGFB1-201ENST00000221930 RASIP1Q5U651 963 aa15.46■□□□□ 0.06
TGFB1-201ENST00000221930 DCLRE1AQ6PJP8 1040 aa15.46■□□□□ 0.06
TGFB1-201ENST00000221930 DSELQ8IZU8 1212 aa15.46■□□□□ 0.06
TGFB1-201ENST00000221930 LSMEM2Q8N112 164 aa15.46■□□□□ 0.06
TGFB1-201ENST00000221930 FICDQ9BVA6 458 aa15.46■□□□□ 0.06
TGFB1-201ENST00000221930 ACOT9Q9Y305 439 aa15.46■□□□□ 0.06
TGFB1-201ENST00000221930 FIS1Q9Y3D6 152 aa15.46■□□□□ 0.06
TGFB1-201ENST00000221930 RGSL1A5PLK6 1076 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 STX16-NPEPL1H3BU86 382 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 TXNDC9O14530 226 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 MSI1O43347 362 aaKnown RBP15.45■□□□□ 0.06
TGFB1-201ENST00000221930 HNRNPRO43390 633 aaKnown RBP15.45■□□□□ 0.06
TGFB1-201ENST00000221930 DDHD2O94830 711 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 THRAP10827 490 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 ARNTP27540 789 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 NUMBP49757 651 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 CSRP3P50461 194 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 SLC12A1Q13621 1099 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 PKN3Q6P5Z2 889 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 ISLR2Q6UXK2 745 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 TMEM86AQ8N2M4 240 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 ATPAF2Q8N5M1 289 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 RCN3Q96D15 328 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 TMEM209Q96SK2 561 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 TBL1YQ9BQ87 522 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 RTP3Q9BQQ7 232 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 TMLHEQ9NVH6 421 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 TTC3P53804 2025 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 NEMP2A6NFY4 417 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 AURKAO14965 403 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 H2AFYO75367 372 aaKnown RBP15.45■□□□□ 0.06
TGFB1-201ENST00000221930 CABYRO75952 493 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 HNRNPCP07910 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
TGFB1-201ENST00000221930 SLC10A3P09131 477 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 FUT4P22083 530 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 PRDX6P30041 224 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 HOXD12P35452 270 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 CHRNA4P43681 627 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 THOP1P52888 689 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 HUNKP57058 714 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 SREBF2Q12772 1141 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 MED21Q13503 144 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 HNRNPDQ14103 355 aaKnown RBP15.45■□□□□ 0.06
TGFB1-201ENST00000221930 PCID2Q5JVF3 399 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 LRRC8EQ6NSJ5 796 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 IQCF2Q8IXL9 164 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 KYQ8NBH2 561 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 STYXQ8WUJ0 223 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 IRGQQ8WZA9 623 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 AP5M1Q9H0R1 490 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 SLC38A7Q9NVC3 462 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 SFMBT1Q9UHJ3 866 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 CDH9Q9ULB4 789 aa15.45■□□□□ 0.06
TGFB1-201ENST00000221930 FAM95CA0A1B0GW59 222 aa15.44■□□□□ 0.06
TGFB1-201ENST00000221930 CAPN8A6NHC0 703 aa15.44■□□□□ 0.06
TGFB1-201ENST00000221930 POMCP01189 267 aa15.44■□□□□ 0.06
TGFB1-201ENST00000221930 ENO3P13929 434 aaPredicted RBP15.44■□□□□ 0.06
TGFB1-201ENST00000221930 VCLP18206 1134 aa15.44■□□□□ 0.06
TGFB1-201ENST00000221930 SLC1A2P43004 574 aa15.44■□□□□ 0.06
TGFB1-201ENST00000221930 BRCC3P46736 316 aa15.44■□□□□ 0.06
TGFB1-201ENST00000221930 CD97P48960 835 aa15.44■□□□□ 0.06
TGFB1-201ENST00000221930 CYLC2Q14093 348 aaPredicted RBP15.44■□□□□ 0.06
TGFB1-201ENST00000221930 TAF1CQ15572 869 aaPredicted RBP15.44■□□□□ 0.06
TGFB1-201ENST00000221930 NOMO2Q5JPE7 1267 aa15.44■□□□□ 0.06
TGFB1-201ENST00000221930 DENND5AQ6IQ26 1287 aa15.44■□□□□ 0.06
TGFB1-201ENST00000221930 LINC00523Q86TU6 105 aa15.44■□□□□ 0.06
TGFB1-201ENST00000221930 ARHGAP12Q8IWW6 846 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms