RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 VARS2Q5ST30 1063 aaKnown RBP22.46■■□□□ 1.19
CCDC9-201ENST00000221922 ARTNQ5T4W7 220 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 AFMIDQ63HM1 303 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 MSANTD2Q6P1R3 559 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 POTEHQ6S545 545 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 MON1AQ86VX9 555 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 NUP93Q8N1F7 819 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 SLAIN1Q8ND83 568 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 PPHLN1Q8NEY8 458 aaKnown RBP22.46■■□□□ 1.19
CCDC9-201ENST00000221922 IPMKQ8NFU5 416 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 SPATA22Q8NHS9 363 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 MAPK15Q8TD08 544 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 C1orf74Q96LT6 269 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 TSNARE1Q96NA8 513 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 CAB39LQ9H9S4 337 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 CYP4F11Q9HBI6 524 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 MRM3Q9HC36 420 aaKnown RBP22.46■■□□□ 1.19
CCDC9-201ENST00000221922 OXSMQ9NWU1 459 aa22.46■■□□□ 1.19
CCDC9-201ENST00000221922 WASH4PA8MWX3 477 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 E9PAM4 449 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 SLC2A3P11169 496 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 POLD2P49005 469 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 PAPOLAP51003 745 aaKnown RBP22.45■■□□□ 1.18
CCDC9-201ENST00000221922 THEMIS2Q5TEJ8 643 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 ACAD11Q709F0 780 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 HPS6Q86YV9 775 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 ARHGAP18Q8N392 663 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 TDRD5Q8NAT2 981 aaKnown RBP22.45■■□□□ 1.18
CCDC9-201ENST00000221922 RDH11Q8TC12 318 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 FBXO44Q9H4M3 255 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 EBF3Q9H4W6 596 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 TLK1Q9UKI8 766 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 DNAJB1P25685 340 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 ARMC3Q5W041 872 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 KBTBD6Q86V97 674 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 ZC3HC1Q86WB0 502 aaKnown RBP22.45■■□□□ 1.18
CCDC9-201ENST00000221922 CNTN4Q8IWV2 1026 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 GALNT15Q8N3T1 639 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 CNDP1Q96KN2 507 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 TUBGCP5Q96RT8 1024 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 FICDQ9BVA6 458 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 GATA5Q9BWX5 397 aaPredicted RBP22.45■■□□□ 1.18
CCDC9-201ENST00000221922 KLHL4Q9C0H6 718 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 MAN1C1Q9NR34 630 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 SLC39A10Q9ULF5 831 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 TLR6Q9Y2C9 796 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 PCDHB5Q9Y5E4 795 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 HS3ST4Q9Y661 456 aa22.45■■□□□ 1.18
CCDC9-201ENST00000221922 TTC3P53804 2025 aa22.44■■□□□ 1.18
CCDC9-201ENST00000221922 EME2A4GXA9 379 aaPredicted RBP22.44■■□□□ 1.18
CCDC9-201ENST00000221922 E9PBE3 544 aa22.44■■□□□ 1.18
CCDC9-201ENST00000221922 KLHL41O60662 606 aa22.44■■□□□ 1.18
CCDC9-201ENST00000221922 MT-CYBP00156 380 aaPredicted RBP22.44■■□□□ 1.18
CCDC9-201ENST00000221922 PIM1P11309 404 aaPredicted RBP22.44■■□□□ 1.18
CCDC9-201ENST00000221922 PEX6Q13608 980 aa22.44■■□□□ 1.18
CCDC9-201ENST00000221922 MRPL58Q14197 206 aaKnown RBP22.44■■□□□ 1.18
CCDC9-201ENST00000221922 CCDC124Q96CT7 223 aaKnown RBP22.44■■□□□ 1.18
CCDC9-201ENST00000221922 DDX50Q9BQ39 737 aaKnown RBP22.44■■□□□ 1.18
CCDC9-201ENST00000221922 SEZ6LQ9BYH1 1024 aa22.44■■□□□ 1.18
CCDC9-201ENST00000221922 ILKAPQ9H0C8 392 aaPredicted RBP22.44■■□□□ 1.18
CCDC9-201ENST00000221922 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.44■■□□□ 1.18
CCDC9-201ENST00000221922 TCF7L2Q9NQB0 619 aa22.44■■□□□ 1.18
CCDC9-201ENST00000221922 RBM22Q9NW64 420 aaKnown RBP eCLIP22.44■■□□□ 1.18
CCDC9-201ENST00000221922 MATN2O00339 956 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 CASQ2O14958 399 aaPredicted RBP22.43■■□□□ 1.18
CCDC9-201ENST00000221922 RNASEH1O60930 286 aaKnown RBP22.43■■□□□ 1.18
CCDC9-201ENST00000221922 MOCS2O96007 188 aaPredicted RBP22.43■■□□□ 1.18
CCDC9-201ENST00000221922 F7P08709 466 aaPredicted RBP22.43■■□□□ 1.18
CCDC9-201ENST00000221922 PAMP19021 973 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 ADRA1AP35348 466 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 HK2P52789 917 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 PRKAA2P54646 552 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 MLLT6P55198 1093 aaPredicted RBP22.43■■□□□ 1.18
CCDC9-201ENST00000221922 GRM3Q14832 879 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 SFT2D3Q587I9 215 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 FAM43BQ6ZT52 329 aaPredicted RBP22.43■■□□□ 1.18
CCDC9-201ENST00000221922 TMEM151AQ8N4L1 468 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.43■■□□□ 1.18
CCDC9-201ENST00000221922 ZFAND2BQ8WV99 257 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 STON2Q8WXE9 905 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 OR52B2Q96RD2 323 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 FSD1LQ9BXM9 530 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 OSER1Q9NX31 292 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 IL37Q9NZH6 218 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 OR6C75A6NL08 312 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 H3BNX3 289 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 HLA-DQB2P05538 268 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 ZCCHC18P0CG32 403 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 ABCG1P45844 678 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 RPL26P61254 145 aaKnown RBP22.43■■□□□ 1.18
CCDC9-201ENST00000221922 MSLNQ13421 630 aaPredicted RBP22.43■■□□□ 1.18
CCDC9-201ENST00000221922 CTXN3Q4LDR2 81 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 DENND5AQ6IQ26 1287 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 ZYG11AQ6WRX3 759 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 ABI1Q8IZP0 508 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 ACVR1CQ8NER5 493 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 GDPD5Q8WTR4 605 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 GBP5Q96PP8 586 aa22.43■■□□□ 1.18
CCDC9-201ENST00000221922 LENG8Q96PV6 779 aaPredicted RBP22.43■■□□□ 1.18
CCDC9-201ENST00000221922 C1QTNF1Q9BXJ1 281 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms