RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CTSLP07711 333 aa27.58■■■□□ 2.01
CHMP4B-201ENST00000217402 CSNK1DP48730 415 aa27.58■■■□□ 2.01
CHMP4B-201ENST00000217402 AP1S1P61966 158 aa27.58■■■□□ 2.01
CHMP4B-201ENST00000217402 MTAPQ13126 283 aa27.58■■■□□ 2.01
CHMP4B-201ENST00000217402 CRY1Q16526 586 aa27.58■■■□□ 2.01
CHMP4B-201ENST00000217402 NCEH1Q6PIU2 408 aa27.58■■■□□ 2.01
CHMP4B-201ENST00000217402 SYT13Q7L8C5 426 aa27.58■■■□□ 2.01
CHMP4B-201ENST00000217402 TRIM51Q9BSJ1 452 aa27.58■■■□□ 2.01
CHMP4B-201ENST00000217402 COL25A1Q9BXS0 654 aaPredicted RBP27.58■■■□□ 2.01
CHMP4B-201ENST00000217402 WASF2Q9Y6W5 498 aa27.58■■■□□ 2.01
CHMP4B-201ENST00000217402 RAD51CO43502 376 aa27.57■■■□□ 2
CHMP4B-201ENST00000217402 MT-CYBP00156 380 aaPredicted RBP27.57■■■□□ 2
CHMP4B-201ENST00000217402 MMP2P08253 660 aa27.57■■■□□ 2
CHMP4B-201ENST00000217402 TERF1P54274 439 aa27.57■■■□□ 2
CHMP4B-201ENST00000217402 RAD51Q06609 339 aa27.57■■■□□ 2
CHMP4B-201ENST00000217402 IHHQ14623 411 aa27.57■■■□□ 2
CHMP4B-201ENST00000217402 PBXIP1Q96AQ6 731 aa27.57■■■□□ 2
CHMP4B-201ENST00000217402 FCRL5Q96RD9 977 aa27.57■■■□□ 2
CHMP4B-201ENST00000217402 FAM129BQ96TA1 746 aa27.57■■■□□ 2
CHMP4B-201ENST00000217402 GORASP1Q9BQQ3 440 aa27.57■■■□□ 2
CHMP4B-201ENST00000217402 CKAP5Q14008 2032 aa27.57■■■□□ 2
CHMP4B-201ENST00000217402 TCRBV21S2A2A0A5A6 115 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 LEFTY1O75610 366 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 MAPK8P45983 427 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 SKOR1P84550 965 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 GPS1Q13098 491 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 PARP6Q2NL67 630 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 POM121L1PQ3SYA9 428 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 ARSIQ5FYB1 569 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 PRPF39Q86UA1 669 aaKnown RBP27.56■■■□□ 2
CHMP4B-201ENST00000217402 MMAAQ8IVH4 418 aaKnown RBP27.56■■■□□ 2
CHMP4B-201ENST00000217402 SPEM1Q8N4L4 309 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 OR2T3Q8NH03 318 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 OXNAD1Q96HP4 312 aaPredicted RBP27.56■■■□□ 2
CHMP4B-201ENST00000217402 CD248Q9HCU0 757 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 RAB6BQ9NRW1 208 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 DLGAP2Q9P1A6 1054 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 ASIC3Q9UHC3 531 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 IL1BP01584 269 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 SERPINF2P08697 491 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 CES1P23141 567 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 PTK6Q13882 451 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 RALGPS1Q5JS13 557 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 C8orf74Q6P047 294 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 CAMK1DQ8IU85 385 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 VOPP1Q96AW1 172 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 MKRN2Q9H000 416 aaKnown RBP27.56■■■□□ 2
CHMP4B-201ENST00000217402 SLC6A17Q9H1V8 727 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 ATP13A3Q9H7F0 1226 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 SARDHQ9UL12 918 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 PCDHGC4Q9Y5F7 938 aa27.56■■■□□ 2
CHMP4B-201ENST00000217402 ALOX15BO15296 676 aa27.55■■■□□ 2
CHMP4B-201ENST00000217402 PMPCBO75439 489 aa27.55■■■□□ 2
CHMP4B-201ENST00000217402 UGT2B4P06133 528 aa27.55■■■□□ 2
CHMP4B-201ENST00000217402 PSMD8P48556 350 aa27.55■■■□□ 2
CHMP4B-201ENST00000217402 COPAP53621 1224 aa27.55■■■□□ 2
CHMP4B-201ENST00000217402 BCL2L1Q07817 233 aa27.55■■■□□ 2
CHMP4B-201ENST00000217402 PRPSAP1Q14558 356 aa27.55■■■□□ 2
CHMP4B-201ENST00000217402 PCSK7Q16549 785 aa27.55■■■□□ 2
CHMP4B-201ENST00000217402 SYCP2LQ5T4T6 812 aa27.55■■■□□ 2
CHMP4B-201ENST00000217402 MAATS1Q7Z4T9 603 aa27.55■■■□□ 2
CHMP4B-201ENST00000217402 DSG4Q86SJ6 1040 aa27.55■■■□□ 2
CHMP4B-201ENST00000217402 MMGT1Q8N4V1 131 aa27.55■■■□□ 2
CHMP4B-201ENST00000217402 RSPH9Q9H1X1 276 aaPredicted RBP27.55■■■□□ 2
CHMP4B-201ENST00000217402 ETNK1Q9HBU6 452 aa27.55■■■□□ 2
CHMP4B-201ENST00000217402 RNASEH1O60930 286 aaKnown RBP27.54■■■□□ 2
CHMP4B-201ENST00000217402 PRNPP04156 253 aa27.54■■■□□ 2
CHMP4B-201ENST00000217402 CLCN5P51795 746 aa27.54■■■□□ 2
CHMP4B-201ENST00000217402 DGKEP52429 567 aa27.54■■■□□ 2
CHMP4B-201ENST00000217402 BASP1P80723 227 aaKnown RBP27.54■■■□□ 2
CHMP4B-201ENST00000217402 SYDE1Q6ZW31 735 aaPredicted RBP27.54■■■□□ 2
CHMP4B-201ENST00000217402 PIP4K2CQ8TBX8 421 aa27.54■■■□□ 2
CHMP4B-201ENST00000217402 PDCD6IPQ8WUM4 868 aaKnown RBP27.54■■■□□ 2
CHMP4B-201ENST00000217402 HHIPQ96QV1 700 aa27.54■■■□□ 2
CHMP4B-201ENST00000217402 TUBGCP5Q96RT8 1024 aa27.54■■■□□ 2
CHMP4B-201ENST00000217402 MLPHQ9BV36 600 aaPredicted RBP27.54■■■□□ 2
CHMP4B-201ENST00000217402 CPEB1Q9BZB8 566 aaKnown RBP27.54■■■□□ 2
CHMP4B-201ENST00000217402 POLMQ9NP87 494 aaPredicted RBP27.54■■■□□ 2
CHMP4B-201ENST00000217402 PPM1HQ9ULR3 514 aa27.54■■■□□ 2
CHMP4B-201ENST00000217402 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP27.53■■■□□ 2
CHMP4B-201ENST00000217402 KPNA3O00505 521 aaPredicted RBP27.53■■■□□ 2
CHMP4B-201ENST00000217402 SERPINA4P29622 427 aa27.53■■■□□ 2
CHMP4B-201ENST00000217402 MAGEA9P43362 315 aa27.53■■■□□ 2
CHMP4B-201ENST00000217402 SATB1Q01826 763 aa27.53■■■□□ 2
CHMP4B-201ENST00000217402 TRAF2Q12933 501 aa27.53■■■□□ 2
CHMP4B-201ENST00000217402 C4orf22Q6V702 233 aa27.53■■■□□ 2
CHMP4B-201ENST00000217402 GDPD4Q6W3E5 623 aa27.53■■■□□ 2
CHMP4B-201ENST00000217402 KDELC2Q7Z4H8 507 aa27.53■■■□□ 2
CHMP4B-201ENST00000217402 PAF1Q8N7H5 531 aa27.53■■■□□ 2
CHMP4B-201ENST00000217402 HMGB4Q8WW32 186 aa27.53■■■□□ 2
CHMP4B-201ENST00000217402 LRRC1Q9BTT6 524 aa27.53■■■□□ 2
CHMP4B-201ENST00000217402 TRIM31Q9BZY9 425 aa27.53■■■□□ 2
CHMP4B-201ENST00000217402 FAM153AQ9UHL3 310 aa27.53■■■□□ 2
CHMP4B-201ENST00000217402 RAI2Q9Y5P3 530 aa27.53■■■□□ 2
CHMP4B-201ENST00000217402 ANXA9O76027 345 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 FDFT1P37268 417 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 ADCY8P40145 1251 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 METAP1P53582 386 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 GRM3Q14832 879 aa27.52■■■□□ 2
CHMP4B-201ENST00000217402 ZNF776Q68DI1 518 aaPredicted RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms