RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 GJB5O95377 273 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 HSPA4LO95757 839 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 SERPINA6P08185 405 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 SLC6A4P31645 630 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 HARS2P49590 506 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 RAB10P61026 200 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 SMARCB1Q12824 385 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 TUBB3Q13509 450 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 SLC12A1Q13621 1099 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 LBRQ14739 615 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 PARP15Q460N3 678 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 ZNF789Q5FWF6 425 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 FAM91A1Q658Y4 838 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 C2CD4AQ8NCU7 369 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 OR6Y1Q8NGX8 325 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 NDNQ99608 321 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 CCDC106Q9BWC9 280 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 PRKD2Q9BZL6 878 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 UBE2OQ9C0C9 1292 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 DENND2DQ9H6A0 471 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 ATP13A1Q9HD20 1204 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 VPS45Q9NRW7 570 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 RUVBL2Q9Y230 463 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 PCDHB12Q9Y5F1 795 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 ACTL7AQ9Y615 435 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 MUSKO15146 869 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 GSC2O15499 205 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 TRIM13O60858 407 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 DIAPH2O60879 1101 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 SBK3P0C264 359 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 STMN1P16949 149 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 CCR10P46092 362 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 CD151P48509 253 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 IL10RBQ08334 325 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 SIRPB2Q5JXA9 342 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 RBM20Q5T481 1227 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 NEPROQ6NW34 567 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 CNSTQ6PJW8 725 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 FSTL5Q8N475 847 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 TEX26Q8N6G2 289 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 TEX9Q8N6V9 391 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 ARRDC2Q8TBH0 407 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 C2orf15Q8WU43 125 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 MCUR1Q96AQ8 359 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 SEMA3CQ99985 751 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 SIKE1Q9BRV8 207 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 VN1R3Q9BXE9 311 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 ARNT2Q9HBZ2 717 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 XPR1Q9UBH6 696 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 FBXO5Q9UKT4 447 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 APOBEC2Q9Y235 224 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 ANKRD6Q9Y2G4 727 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 CHD5Q8TDI0 1954 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 ENTPD5O75356 428 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 CHRNGP07510 517 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 CCND1P24385 295 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 ATP5C1P36542 298 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 IDH3AP50213 366 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 ZNF235Q14590 738 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 TSTD2Q5T7W7 516 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 PTAR1Q7Z6K3 402 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 TMEM151AQ8N4L1 468 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 OR52K2Q8NGK3 314 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 OR13J1Q8NGT2 312 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 TTC8Q8TAM2 541 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 SREK1Q8WXA9 508 aaKnown RBP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 FATE1Q969F0 183 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 NXNL1Q96CM4 212 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 FAM167BQ9BTA0 163 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 TTLL2Q9BWV7 592 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 GATA5Q9BWX5 397 aaPredicted RBP8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 OXSMQ9NWU1 459 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 MTRRQ9UBK8 725 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 DNMT3LQ9UJW3 386 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 ACOT9Q9Y305 439 aa8.06□□□□□ -1.12
HMGXB4-201ENST00000216106 B2RBV5 119 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 ZNF195O14628 629 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 EZRP15311 586 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 MAPKAPK2P49137 400 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 TAS2R39P59534 338 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 DLG1Q12959 904 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 USP41Q3LFD5 358 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 ACCSLQ4AC99 568 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 SLC8B1Q6J4K2 584 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 KIAA1841Q6NSI8 718 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 LRRC8EQ6NSJ5 796 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 LDB1Q86U70 411 aaPredicted RBP8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 DENND1CQ8IV53 801 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 OR7D4Q8NG98 312 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 POLR1EQ9GZS1 481 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 NKX1-2Q9UD57 310 aaPredicted RBP8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 KCTD3Q9Y597 815 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 ZFP37Q9Y6Q3 630 aaPredicted RBP8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 OR51F1A6NGY5 319 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 H0Y3Z8 333 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 BUD23O43709 281 aaKnown RBP8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 PRAMEF11O60813 436 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 SIN3BO75182 1162 aa8.05□□□□□ -1.12
HMGXB4-201ENST00000216106 PEX11AO75192 247 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms