RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 MMP3P08254 477 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 CKMT2P17540 419 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 DRICH1Q6PGQ1 229 aaPredicted RBP11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 OFCC1Q8IZS5 231 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 CBR4Q8N4T8 237 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 CPXM1Q96SM3 734 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 IGFLR1Q9H665 355 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 EFR3BQ9Y2G0 817 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 HES2Q9Y543 173 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 ZNF536O15090 1300 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 TRAFD1O14545 582 aaPredicted RBP11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 ASS1P00966 412 aaKnown RBP11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 XRCC1P18887 633 aaPredicted RBP11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 TFEBP19484 476 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 THOP1P52888 689 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 GBE1Q04446 702 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 GRB14Q14449 540 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 ARL13AQ5H913 290 aaPredicted RBP11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 METTL21CQ5VZV1 264 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 FRMD7Q6ZUT3 714 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 TTC30AQ86WT1 665 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 ZDHHC14Q8IZN3 488 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 C8orf59Q8N0T1 100 aaPredicted RBP11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 POC5Q8NA72 575 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 BLOC1S5Q8TDH9 187 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 C11orf49Q9H6J7 331 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 CDHR5Q9HBB8 845 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 MORF4L1Q9UBU8 362 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 AAR2Q9Y312 384 aaKnown RBP11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 UBIAD1Q9Y5Z9 338 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 DGKBQ9Y6T7 804 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 CLUHO75153 1309 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 GON4LQ3T8J9 2241 aa11.65□□□□□ -0.54
DNMT3B-201ENST00000201963 FAM95CA0A1B0GW59 222 aa11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 MAGEB16A2A368 324 aa11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 KCNU1A8MYU2 1149 aa11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 PLA2G6O60733 806 aa11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 CNOT3O75175 753 aaKnown RBP11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 H6PDO95479 791 aa11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 PABPC4LP0CB38 370 aaKnown RBP11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 CRABP2P29373 138 aa11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 GJA8P48165 433 aa11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 MRPL28Q13084 256 aaKnown RBP11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 NAB1Q13506 487 aa11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 SLC41A1Q8IVJ1 513 aa11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 PGAM4Q8N0Y7 254 aa11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 DAW1Q8N136 415 aa11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 SKA1Q96BD8 255 aa11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 PTCD3Q96EY7 689 aaKnown RBP11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 PPP1R10Q96QC0 940 aaKnown RBP11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 RNF112Q9ULX5 631 aa11.65□□□□□ -0.55
DNMT3B-201ENST00000201963 SPATA31C2B4DYI2 1134 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 ITM2AO43736 263 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 SEC24AO95486 1093 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 CST3P01034 146 aaPredicted RBP11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 CFHP08603 1231 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 CHRM3P20309 590 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 SLC6A3Q01959 620 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 LSAMPQ13449 338 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 IKBKEQ14164 716 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 LIPMQ5VYY2 423 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 NOTUMQ6P988 496 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 FAM183BPQ6ZVS7 135 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 TAGAPQ8N103 731 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 EFHBQ8N7U6 833 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 NAT8LQ8N9F0 302 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 ATG16L2Q8NAA4 619 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 SLC35B2Q8TB61 432 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 CD101Q93033 1021 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 COQ7Q99807 217 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 GATA5Q9BWX5 397 aaPredicted RBP11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 EPS8L2Q9H6S3 715 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 ZNF358Q9NW07 568 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 IMPAD1Q9NX62 359 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 CXorf49A8MYA2 514 aaPredicted RBP11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 ZNF682O95780 498 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 GNRH1P01148 92 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 AMHP03971 560 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 CYP1A1P04798 512 aaPredicted RBP11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 IMPDH2P12268 514 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 ADSSP30520 456 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 BCAT1P54687 386 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 LAMTOR4Q0VGL1 99 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 KYAT1Q16773 422 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 ZPBP2Q6X784 338 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 RNF19BQ6ZMZ0 732 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 UBR7Q8N806 425 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 ACTRT2Q8TDY3 377 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 TRPC4APQ8TEL6 797 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 LATS2Q9NRM7 1088 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 VPS45Q9NRW7 570 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 TMEM114B3SHH9 223 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 PAPSS1O43252 624 aaPredicted RBP11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 SNAP91O60641 907 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 SOAT2O75908 522 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 EN2P19622 333 aaPredicted RBP11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 SLC26A2P50443 739 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 GEMP55040 296 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 SPIRE1Q08AE8 756 aa11.64□□□□□ -0.55
DNMT3B-201ENST00000201963 ARMC4Q5T2S8 1044 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms