RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 IRF5Q13568 498 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 PDK3Q15120 406 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 SLC5A9Q2M3M2 681 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.29□□□□□ -0.28
CTNS-201ENST00000046640 MFSD6LQ8IWD5 586 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 GALNT4Q8N4A0 578 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 CCNYL1Q8N7R7 359 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 IRGQQ8WZA9 623 aa13.29□□□□□ -0.28
CTNS-201ENST00000046640 ACE2Q9BYF1 805 aaPredicted RBP13.29□□□□□ -0.28
CTNS-201ENST00000046640 SCN10AQ9Y5Y9 1956 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 ERI2A8K979 691 aaKnown RBP13.28□□□□□ -0.28
CTNS-201ENST00000046640 TNFRSF10BO14763 440 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 GRK2P25098 689 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 FCGRTP55899 365 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 MRPS22P82650 360 aaKnown RBP13.28□□□□□ -0.28
CTNS-201ENST00000046640 FOLH1Q04609 750 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 NAB1Q13506 487 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 GK3PQ14409 553 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 DSC3Q14574 896 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 PSMD5Q16401 504 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 ZNF789Q5FWF6 425 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 IL31Q6EBC2 164 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 DENND5AQ6IQ26 1287 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 PAOXQ6QHF9 649 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 RPS27LQ71UM5 84 aaKnown RBP13.28□□□□□ -0.28
CTNS-201ENST00000046640 APLFQ8IW19 511 aaPredicted RBP13.28□□□□□ -0.28
CTNS-201ENST00000046640 TDRD5Q8NAT2 981 aaKnown RBP13.28□□□□□ -0.28
CTNS-201ENST00000046640 DPF3Q92784 378 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 CMTM5Q96DZ9 223 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 DNAJC1Q96KC8 554 aaKnown RBP13.28□□□□□ -0.28
CTNS-201ENST00000046640 VAT1Q99536 393 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 OSBPL2Q9H1P3 480 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 NT5MQ9NPB1 228 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 ARHGEF38Q9NXL2 777 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 IPO11Q9UI26 975 aaKnown RBP13.28□□□□□ -0.28
CTNS-201ENST00000046640 APPL1Q9UKG1 709 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 TRPM7Q96QT4 1865 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 STX16-NPEPL1H3BU86 382 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 CYP11A1P05108 521 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 COG7P83436 770 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 LAMB3Q13751 1172 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 INSCQ1MX18 579 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 CCDC153Q494R4 210 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 ALFQ53S48 1182 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 STXBP5Q5T5C0 1151 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 PIK3R6Q5UE93 754 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 TMEM198Q66K66 360 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 ZNF470Q6ECI4 717 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 PKN3Q6P5Z2 889 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 IYDQ6PHW0 289 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 FAM156AQ8NDB6 213 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 ICA1LQ8NDH6 482 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 PIP4K2CQ8TBX8 421 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 NXNL1Q96CM4 212 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 SUSD3Q96L08 255 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 CNBD2Q96M20 576 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 GMIPQ9P107 970 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 AAR2Q9Y312 384 aaKnown RBP13.28□□□□□ -0.28
CTNS-201ENST00000046640 RAD54BQ9Y620 910 aa13.28□□□□□ -0.28
CTNS-201ENST00000046640 MAGEB16A2A368 324 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 NEMP2A6NFY4 417 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 NT5C1B-RDH14C9J2C7 533 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 ZNF195O14628 629 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 TIMM44O43615 452 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 TRIM13O60858 407 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 MYCP01106 439 aaPredicted RBP13.27□□□□□ -0.28
CTNS-201ENST00000046640 IGLV3-25P01717 112 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 HAPLN1P10915 354 aaPredicted RBP13.27□□□□□ -0.28
CTNS-201ENST00000046640 ENO3P13929 434 aaPredicted RBP13.27□□□□□ -0.28
CTNS-201ENST00000046640 CCNCP24863 283 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 GRIA4P48058 902 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 BTKQ06187 659 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 GLB1LQ6UWU2 654 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 ACAD11Q709F0 780 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 SNX32Q86XE0 403 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 FBXW8Q8N3Y1 598 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 FSTL5Q8N475 847 aaPredicted RBP13.27□□□□□ -0.28
CTNS-201ENST00000046640 ZFAND2BQ8WV99 257 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 ELMO2Q96JJ3 720 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 NUF2Q9BZD4 464 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 UBE2OQ9C0C9 1292 aaKnown RBP13.27□□□□□ -0.28
CTNS-201ENST00000046640 CATSPERBQ9H7T0 1116 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 SSX2IPQ9Y2D8 614 aa13.27□□□□□ -0.28
CTNS-201ENST00000046640 hCG_2014768A0A024R1R8 64 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 MATN3O15232 486 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 CCNT2O60583 730 aaKnown RBP13.27□□□□□ -0.29
CTNS-201ENST00000046640 SLC35E2BP0CK96 405 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 ARNTP27540 789 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 SLC1A2P43004 574 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 GATMP50440 423 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 SLC10A7Q0GE19 358 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 KLF10Q13118 480 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 ANO4Q32M45 955 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 PCID2Q5JVF3 399 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 CLLU1OSQ5K130 101 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 PTAR1Q7Z6K3 402 aaPredicted RBP13.27□□□□□ -0.29
CTNS-201ENST00000046640 ACTRT2Q8TDY3 377 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 CDRT15Q96T59 188 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 KIFC1Q9BW19 673 aa13.27□□□□□ -0.29
CTNS-201ENST00000046640 FAM192AQ9GZU8 254 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms