RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 PCDHGC4Q9Y5F7 938 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 GOLGA6L9A6NEM1 432 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 FGGP02679 453 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 RBP3P10745 1247 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 CR2P20023 1033 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 PTGER3P43115 390 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 DSC2Q02487 901 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 AGBL4Q5VU57 503 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 GDPD4Q6W3E5 623 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 BZW1Q7L1Q6 419 aaKnown RBP12.19□□□□□ -0.46
SYPL1-201ENST00000011473 PARS2Q7L3T8 475 aaKnown RBP12.19□□□□□ -0.46
SYPL1-201ENST00000011473 SRLQ86TD4 932 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 PLPP6Q8IY26 295 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 OR14C36Q8NHC7 312 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 COG1Q8WTW3 980 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 SEMA3CQ99985 751 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 BTBD1Q9H0C5 482 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 C6orf106Q9H6K1 298 aaPredicted RBP12.19□□□□□ -0.46
SYPL1-201ENST00000011473 SCUBE2Q9NQ36 999 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 DYRK4Q9NR20 520 aa12.19□□□□□ -0.46
SYPL1-201ENST00000011473 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.19□□□□□ -0.46
SYPL1-201ENST00000011473 ZNF185O15231 689 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 IGLV3-19P01714 112 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 PRKCGP05129 697 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 ITIH2P19823 946 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 PTPN3P26045 913 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 ADPRHP54922 357 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 IFI35P80217 286 aaPredicted RBP12.18□□□□□ -0.46
SYPL1-201ENST00000011473 SEMG2Q02383 582 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 RAD51Q06609 339 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 NSUN2Q08J23 767 aaKnown RBP eCLIP12.18□□□□□ -0.46
SYPL1-201ENST00000011473 WASHC5Q12768 1159 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 PLK5Q496M5 336 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 SLC45A4Q5BKX6 768 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 PIP5KL1Q5T9C9 394 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 ZSWIM9Q86XI8 627 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 BBS5Q8N3I7 341 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 PDCD6IPQ8WUM4 868 aaKnown RBP12.18□□□□□ -0.46
SYPL1-201ENST00000011473 C1orf54Q8WWF1 131 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 HTR3CQ8WXA8 447 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 QKIQ96PU8 341 aaKnown RBP eCLIP12.18□□□□□ -0.46
SYPL1-201ENST00000011473 IL12RB2Q99665 862 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 POLR1EQ9GZS1 481 aaKnown RBP12.18□□□□□ -0.46
SYPL1-201ENST00000011473 DUSP15Q9H1R2 295 aaPredicted RBP12.18□□□□□ -0.46
SYPL1-201ENST00000011473 DNPEPQ9ULA0 475 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 SCML1Q9UN30 329 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 ITM2BQ9Y287 266 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 NCKAP1Q9Y2A7 1128 aa12.18□□□□□ -0.46
SYPL1-201ENST00000011473 C16orf96A6NNT2 1141 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 NDUFS2O75306 463 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 C7P10643 843 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 CNR2P34972 360 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 NBL1P41271 181 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 TAS2R38P59533 333 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 NIPAL4Q0D2K0 466 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 ZNF805Q5CZA5 627 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 DARS2Q6PI48 645 aaKnown RBP12.17□□□□□ -0.46
SYPL1-201ENST00000011473 NCEH1Q6PIU2 408 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 USP30Q70CQ3 517 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 ERN2Q76MJ5 926 aaKnown RBP12.17□□□□□ -0.46
SYPL1-201ENST00000011473 NUDCD1Q96RS6 583 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 TMEM121Q9BTD3 319 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 EPC1Q9H2F5 836 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 ATP13A3Q9H7F0 1226 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 GGT7Q9UJ14 662 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 SMG5Q9UPR3 1016 aaKnown RBP12.17□□□□□ -0.46
SYPL1-201ENST00000011473 ATXN2Q99700 1313 aaKnown RBP12.17□□□□□ -0.46
SYPL1-201ENST00000011473 EML5Q05BV3 1969 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 KCNN4O15554 427 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 SEMA4FO95754 770 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 ADRB3P13945 408 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 ITGB7P26010 798 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 MAOBP27338 520 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 ZNF33AQ06730 810 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 BCL2L1Q07817 233 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 SNX1Q13596 522 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 SIX1Q15475 284 aaPredicted RBP12.17□□□□□ -0.46
SYPL1-201ENST00000011473 TEX44Q53QW1 395 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 FBXL19Q6PCT2 694 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 TTC7BQ86TV6 843 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 SLC41A1Q8IVJ1 513 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 PAF1Q8N7H5 531 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 ARRDC2Q8TBH0 407 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 FATE1Q969F0 183 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 TRIM44Q96DX7 344 aaPredicted RBP12.17□□□□□ -0.46
SYPL1-201ENST00000011473 PPP1R16AQ96I34 528 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 HSPA12BQ96MM6 686 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 OSBPL9Q96SU4 736 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 OSBPL1AQ9BXW6 950 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 CPEB1Q9BZB8 566 aaKnown RBP12.17□□□□□ -0.46
SYPL1-201ENST00000011473 BRD8Q9H0E9 1235 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 SUV39H2Q9H5I1 410 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 UBP1Q9NZI7 540 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 ATP8A1Q9Y2Q0 1164 aa12.17□□□□□ -0.46
SYPL1-201ENST00000011473 SHROOM3Q8TF72 1996 aa12.16□□□□□ -0.46
SYPL1-201ENST00000011473 TRAFD1O14545 582 aaPredicted RBP12.16□□□□□ -0.46
SYPL1-201ENST00000011473 MT-CYBP00156 380 aaPredicted RBP12.16□□□□□ -0.46
SYPL1-201ENST00000011473 MSNP26038 577 aaKnown RBP12.16□□□□□ -0.46
SYPL1-201ENST00000011473 SERPINA4P29622 427 aa12.16□□□□□ -0.46
SYPL1-201ENST00000011473 CD68P34810 354 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms