RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Mtx3D3YTP3 312 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Vmn2r59E9PUT5 865 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Prpmp5E9PXN1 296 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Pcbp1P60335 356 aaKnown RBP13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Echdc2Q3TLP5 296 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Fbxw11Q5SRY7 542 aaKnown RBP13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Q6PAC4 1279 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Vtcn1Q7TSP5 283 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Lrrc8dQ8BGR2 859 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Slfn5Q8CBA2 884 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Snrnp27Q8K194 155 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Olfr697Q8VFM4 317 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 4930513O06RikQ9D549 161 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 GraspQ9JJA9 392 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Pld1Q9Z280 1074 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Olfr1049A2ARZ0 308 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Srp72F8VQC1 671 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Vmn2r5K7N788 911 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 AmacrO09174 381 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 BtrcQ3ULA2 605 aaKnown RBP13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Fnip1Q68FD7 1165 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Thop1Q8C1A5 687 aaKnown RBP13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Sgsm3Q8VCZ6 750 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ttll9A2APC3 461 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Btnl4A2CG29 586 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Gbp4A4UUI3 631 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Rb1P13405 921 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Tap1P21958 724 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 PuraP42669 321 aaKnown RBP13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Gm1604bQ3TRG0 118 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Mansc4Q3UU94 337 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Tmem45aQ60774 273 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Cfap97Q6ZPR1 541 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Uts2bQ765I1 113 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Dsg1bQ7TSF1 1060 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Dnajb13Q80Y75 316 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Tmem198Q8BG75 360 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Mettl21cQ8BLU2 248 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Hacd3Q8K2C9 362 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ces2aQ8QZR3 558 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Exd2Q8VEG4 650 aaKnown RBP13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Syt12Q920N7 421 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Q922R1 422 aa13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Rpn2Q9DBG6 631 aaKnown RBP13.37□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 2210016F16RikG3X8U3 338 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Znf683I7HJS4 458 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Calhm3J3QMI4 347 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Got2P05202 430 aaKnown RBP13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Rbp1Q00915 135 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ubxn7Q6P5G6 467 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Rasa4Q6PFQ7 802 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Cdc14bQ6PFY9 485 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Rps27lQ6ZWY3 84 aaKnown RBP13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Cops7bQ8BV13 264 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Bag5Q8CI32 447 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Fnbp1lQ8K012 605 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Wnt9aQ8R5M2 365 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Mrpl1Q99N96 336 aaKnown RBP13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Nuf2Q99P69 463 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Mrps17Q9CQE3 120 aaKnown RBP13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 PompQ9CQT5 141 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Gm28168A0A087WNP1 180 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Gm3248K7N721 186 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Tpst1O70281 370 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Il6raP22272 460 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Serpina3cP29621 417 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Tas2r16P59529 299 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Rab10P61027 200 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Elf3Q3UPW2 391 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Tex24Q5DP50 351 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Znf280cQ6P3Y5 742 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Scaf4Q6PFF0 1209 aaKnown RBP13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 RfflQ6ZQM0 377 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Tas2r129Q7M709 320 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Tyw3Q8BSA9 257 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Plin5Q8BVZ1 463 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Stx5Q8K1E0 355 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Pramel1Q99MW3 458 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 XpotQ9CRT8 963 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Agpat3Q9D517 376 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ddx59Q9DBN9 619 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Pak1ip1Q9DCE5 382 aaKnown RBP13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Fut2Q9JL27 347 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Trpc4apQ9JLV2 797 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Usp51B1AY15 661 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Cd151O35566 253 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Pde9aO70628 534 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 SykP48025 629 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ctps1P70698 591 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Ccdc61Q3UJV1 511 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Podnl1Q6P3Y9 559 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Arhgap26Q6ZQ82 814 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Slc44a2Q8BY89 706 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Smyd2Q8R5A0 433 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Dach2Q925Q8 634 aa13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Vps35Q9EQH3 796 aaKnown RBP13.36□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Gm4756A0A140LIS8 335 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Rhbdl2A2AGA4 302 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Olfr603L7N1Y4 312 aa13.35□□□□□ -0.27
Pdgfra-205ENSMUST00000201711 Dnase1l3O55070 310 aa13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms