RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Tbl2Q9R099 442 aaKnown RBP9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Fads2Q9Z0R9 444 aaKnown RBP9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Adcy9P51830 1353 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gm42688A0A0R3P9D1 673 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rhox3fA2ANE1 215 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rhox3cA2AWM0 215 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Mtx3D3YTP3 312 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 E9QMW4 1145 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rhox3hL7MU37 215 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Hcn3O88705 779 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Igfbp4P47879 254 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Epb41P48193 858 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Sult2a1P52843 285 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rps12P63323 132 aaKnown RBP9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Meis2P97367 477 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rnf133Q14B02 382 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Trim40Q3UWA4 246 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Nt5c2Q3V1L4 560 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rhox3aQ4TU90 215 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Parp6Q6P6P7 630 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Adam39Q7M762 756 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Olfr1087Q7TR63 313 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ankzf1Q80UU1 748 aaKnown RBP9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Sult1c1Q80VR3 304 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 ChfrQ810L3 664 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Pqlc3Q8C6U2 202 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ccdc142Q8CAI1 738 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ccdc14Q8K2J4 934 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Amhr2Q8K592 568 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Zdhhc1Q8R0N9 484 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Chn1Q91V57 459 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Pop4Q9CR08 221 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Pbld2Q9CXN7 288 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Acp1Q9D358 158 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Clvs1Q9D4C9 354 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Scamp5Q9JKD3 235 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ca5bQ9QZA0 317 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 DstnQ9R0P5 165 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 IkbkeQ9R0T8 717 aa9.19□□□□□ -0.94
Upf3b-201ENSMUST00000076265 C4bP01029 1738 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Kndc1Q0KK55 1742 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rtl9Q32KG4 1339 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Trav23A0A0G2JG17 115 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gm11634A0A1B0GSX1 172 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gm34653A0A1L1SR01 368 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 PnnO35691 725 aaKnown RBP9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Nmt2O70311 529 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Magea8O89012 320 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 PnpP23492 289 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cd40lgP27548 260 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Slc2a3P32037 493 aaKnown RBP9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 EdnrbP48302 442 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 GaaP70699 953 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 SmsP97355 366 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ctnnb1Q02248 781 aaKnown RBP9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gas2l3Q3UWW6 683 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ankrd13cQ3UX43 541 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 1810065E05RikQ5NC41 235 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Foxj1Q61660 421 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Atg9aQ68FE2 551 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 N4bp1Q6A037 893 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Phf24Q80TL4 400 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Il17reQ8BH06 637 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rnf144bQ8BKD6 301 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Slc25a24Q8BMD8 475 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Smad3Q8BUN5 425 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 AntxrlQ8BVM2 641 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Slc7a14Q8BXR1 771 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Map1sQ8C052 973 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gm13199Q8C8E0 125 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Aldh4a1Q8CHT0 562 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rab14Q91V41 215 aaKnown RBP9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Nsmce2Q91VT1 247 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Ap1s2Q9DB50 160 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cdip1Q9DB75 208 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 March8Q9DBD2 286 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 PllpQ9DCU2 182 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Add3Q9QYB5 706 aaKnown RBP9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 EcsitQ9QZH6 435 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Adam24Q9R160 761 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Lrp5Q91VN0 1614 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Tiam2Q6ZPF3 1715 aa9.18□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Gm6509A0A0J9YUV1 481 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 4933424G06RikA0A140LIP3 267 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cdc34bA0A140T8I4 237 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Fam71f2B2RXB0 297 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Olfr652B9EHE6 318 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Serpina16D3Z660 418 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Zfp26P10076 861 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 HmbsP22907 361 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 EzrP26040 586 aaKnown RBP9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cyp19a1P28649 503 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Rpl6P47911 296 aaKnown RBP9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Apoa1Q00623 264 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 B4galnt1Q09200 533 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Mcm9Q2KHI9 1134 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Cmpk2Q3U5Q7 447 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 D630036H23RikQ3UQD6 204 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Itpripl2Q3UV16 535 aa9.17□□□□□ -0.94
Upf3b-201ENSMUST00000076265 Afg1lQ3V384 480 aa9.17□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms