RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Slc41a1Q8BJA2 512 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 RergQ8R367 199 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ca9Q8VHB5 437 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 BollQ924M5 281 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 5530400C23RikQ9D3I0 173 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Med8Q9D7W5 268 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cd36Q08857 472 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 LcorlQ3U285 600 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Dennd5aQ6PAL8 1287 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Scaf4Q6PFF0 1209 aaKnown RBP12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Chst10Q6PGK7 356 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Olfr813Q7TRH5 310 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Asnsd1Q8BFS9 627 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Samd4aQ8CBY1 711 aaKnown RBP12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Slc35c2Q8VCX2 364 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Snapc2Q91XA5 359 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Nos1apQ9D3A8 503 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ubqln2Q9QZM0 638 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Fut8Q9WTS2 575 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 CntrlA2AL36 2334 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Il4i1O09046 630 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Map2k3O09110 347 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 CidecP56198 239 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 ZufspQ3T9Z9 577 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 IntS13Q8QZV7 732 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tceal3Q8R0A5 200 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Olfr2Q9QWU6 327 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gm3642K7N6V4 267 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Hsd17b7O88736 334 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Alg10bQ3UGP8 474 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Dus2Q9D7B1 493 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Coro1cQ9WUM4 474 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 EnpepP16406 945 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 PnocQ64387 187 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ca4Q64444 305 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tmem59lQ7TNI2 337 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Leg1Q8C6C9 337 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Wdr26Q8C6G8 641 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rassf3Q99P51 232 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 AfdnQ9QZQ1 1820 aaKnown RBP12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gm3147A0A0J9YU88 481 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gm10424A0A0J9YVD0 481 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Mtx3D3YTP3 312 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Vmn2r73D3Z7M3 851 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gm7971J3QMM8 481 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 PdgfaP20033 211 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Jak1P52332 1153 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Lilrb3P97484 841 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 C1qtnf7Q8BVD7 289 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Epm2aQ9WUA5 330 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Arfip1G5E8V9 373 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 DcnP28654 354 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rin3P59729 980 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Olfr213Q7TS32 327 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Hyal5Q812F3 526 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 EtnpplQ8BWU8 499 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Spdye4bQ8CDE8 236 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tab1Q8CF89 502 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Mrpl48Q8JZS9 211 aaKnown RBP12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tnfaip8l1Q8K288 186 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gprc5cQ8K3J9 440 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Serpinb1bQ8VHP7 382 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Celf2Q9Z0H4 508 aaKnown RBP12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 4933424G06RikA0A140LIP3 267 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Il13ra2O88786 383 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 TnfP06804 235 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Lsm3P62311 102 aaKnown RBP12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 UcmaQ14BU0 138 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tlr12Q6QNU9 906 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Efcab7Q8VDY4 628 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Nsmce2Q91VT1 247 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 MmadhcQ99LS1 296 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tma16Q9CR02 221 aaKnown RBP12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Wdr73Q9CWR1 371 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ifrd1P19182 449 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Htr5bP31387 370 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rpusd2Q149F1 553 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Grm2Q14BI2 872 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Dact1Q8R4A3 778 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Olfr1352Q8VGX5 309 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ribc2Q9D4Q1 309 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Vmn2r27D3YUK6 857 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Bbip1J3QMK2 67 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Hnf4aP49698 474 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Morf4l1P60762 362 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Spata5Q3UMC0 893 aaKnown RBP12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Mapkapk3Q3UMW7 384 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Trpv1Q704Y3 839 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cnpy4Q8BQ47 245 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tmprss4Q8VCA5 435 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Det1Q9D0A0 550 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 EbplQ9D0P0 206 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gria4Q9Z2W8 902 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ssxb8B1AY40 170 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Arhgef33Q8BW86 850 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 AenQ9CZI9 336 aaKnown RBP12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Prdm12A2AJ77 365 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ttll3A4Q9E5 927 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 DgkdE9PUQ8 1220 aa12.03□□□□□ -0.48
Trim56-201ENSMUST00000054384 Phka1P18826 1241 aa12.03□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms