RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Ddx24Q9ESV0 857 aaKnown RBP20.31■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 PnkpQ9JLV6 522 aaKnown RBP20.31■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Il17bQ9QXT6 180 aa20.31■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 ArntlQ9WTL8 632 aa20.31■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Pck1Q9Z2V4 622 aa20.31■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 NbasE9Q411 2356 aa20.31■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Unc13cQ8K0T7 2210 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Gm3373A6NAS7 205 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Zbtb10E9Q8X5 861 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Gp1baO35930 734 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 PrlP06879 226 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Il12bP43432 335 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Gabpb2P81069 414 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 SgcgP82348 291 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Sap25Q1EHW4 186 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 FaxcQ3UMF9 409 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Lrig2Q52KR2 1054 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Taf3Q5HZG4 932 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Sf1Q64213 653 aaKnown RBP20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Zmpste24Q80W54 475 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Cdkn3Q810P3 211 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Tarsl2Q8BLY2 790 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Gtf3c4Q8BMQ2 817 aaKnown RBP20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Cdcp2Q8BQH6 427 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Klhl36Q8R124 613 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Lrrc26Q91W20 331 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 TardbpQ921F2 414 aaKnown RBP20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Slc26a5Q99NH7 744 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Rnf135Q9CWS1 417 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 ItpaQ9D892 198 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Prl8a6Q9DAY2 240 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 RhoaQ9QUI0 193 aa20.3■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 C7D3YXF5 845 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Zscan4bE9Q3G0 505 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Gm4847G3X946 537 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Gm20878L7N244 103 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Agpat1O35083 285 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 ColqO35348 457 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Cxcr2P35343 359 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 HnrnpkP61979 463 aaKnown RBP20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 SiaeP70665 541 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Hspb6Q5EBG6 162 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Clec18aQ7TSQ1 534 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Prickle2Q80Y24 845 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Hook3Q8BUK6 718 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Rnf222Q8CEF8 211 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Upp2Q8CGR7 320 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 RhoqQ8R527 205 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Olfr398Q8VFY0 314 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Pcdhb11Q91UZ8 797 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Aim2Q91VJ1 354 aaKnown RBP20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Asic2Q925H0 512 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Bcl7aQ9CXE2 210 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Cdkn2aipnlQ9D211 116 aaKnown RBP20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Tsga13Q9DA17 273 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Sertad2Q9JJG5 309 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Trim10Q9WUH5 489 aa20.29■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Gm9920D3YVZ2 140 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Gm20390E9PZF0 267 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 E230025N22RikG5E8S3 482 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Il13ra1O09030 424 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 SlkO54988 1233 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Ifnb1P01575 182 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Timp2P25785 220 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Ckmt1P30275 418 aaKnown RBP20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Fpr1P33766 364 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Ndst2P52850 883 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Smpdl3bP58242 456 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Nme2Q01768 152 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Scrn3Q3TMH2 418 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Pnliprp1Q5BKQ4 473 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 AcdQ5EE38 416 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 SrlQ7TQ48 910 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 TdrkhQ80VL1 560 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Sh3rf3Q8C120 878 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Sfrp1Q8C4U3 314 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Fam13bQ8K2H3 851 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Caap1Q8VDY9 356 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Creld1Q91XD7 420 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Atpaf2Q91YY4 289 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 MpstQ99J99 297 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Pex6Q99LC9 981 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Vkorc1Q9CRC0 161 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Acp1Q9D358 158 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Arl13aQ9D416 372 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Copg1Q9QZE5 874 aa20.28■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Vmn2r34E9PVI0 852 aa20.27■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Vmn2r37F8VQD3 802 aa20.27■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Zfp850J3QPC5 689 aa20.27■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Mtnd3P03899 115 aa20.27■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Sod1P08228 154 aaKnown RBP20.27■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Sox5P35710 763 aa20.27■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Mmp7Q10738 264 aa20.27■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 CenplQ3U3S3 329 aa20.27■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Tfap2bQ61313 459 aa20.27■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Q8BGK9 164 aa20.27■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Fam110bQ8C739 366 aa20.27■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Atg14Q8CDJ3 492 aa20.27■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Ipo11Q8K2V6 975 aa20.27■□□□□ 0.84
Ttc39b-201ENSMUST00000030205 Glipr1l2Q9CQ35 332 aa20.27■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms