RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Skint6A7XUZ6 1240 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Speer4cG3UXD1 256 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Trim15G3UY57 292 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Gm10354K7N6A0 256 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Angpt2O35608 496 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 LdlrP35951 862 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Dnal1Q05A62 190 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Grm6Q5NCH9 871 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Ggnbp1Q6K1E7 370 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Rxfp1Q6R6I7 758 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Cand1Q6ZQ38 1230 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Clec4b1Q7TS58 209 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Wdtc1Q80ZK9 677 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Gtf3c4Q8BMQ2 817 aaKnown RBP12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Clptm1lQ8BXA5 539 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Rprd1aQ8VDS4 312 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Tcaf2Q921K8 919 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 CinpQ9D0V8 212 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Ccdc81Q9D5W4 654 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Smpd3Q9JJY3 655 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Fibcd1A2AV25 459 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Celf5D3Z4T1 395 aaKnown RBP12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Pgbd1E9Q492 415 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Gm8011K7N6Y5 207 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Kif1cO35071 1100 aaKnown RBP12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Mmp10O55123 476 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Ces5aQ6AW46 575 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Bend6Q6PFX2 281 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 SyncripQ7TMK9 623 aaKnown RBP12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Tecpr1Q80VP0 1166 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Atp2c1Q80XR2 918 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Tdp1Q8BJ37 609 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Fzd10Q8BKG4 582 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Elmo1Q8BPU7 727 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Asrgl1Q8C0M9 326 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Mrpl1Q99N96 336 aaKnown RBP12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Pole4Q9CQ36 118 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Zswim7Q9CWQ2 152 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 PyglQ9ET01 850 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Wnt8bQ9WUD6 350 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 UprtB1AVZ0 310 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 AunipE9Q6Z5 340 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Vmn2r14E9Q759 848 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 TnfP06804 235 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Dpy19l2P0CW70 773 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 BrafP28028 804 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Fitm2P59266 262 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Pcsk1P63239 753 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Gm1587Q3UT80 123 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Ubap2lQ80X50 1107 aaKnown RBP12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Dis3lQ8C0S1 1053 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Tma7Q8K003 64 aaKnown RBP12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Ppp1r8Q8R3G1 351 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Pcdha2Q91Y17 948 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Eif2b2Q99LD9 351 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Hipk3Q9ERH7 1192 aa12.87□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Btaf1E9QAE3 1848 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Cntnap3E9PY62 1287 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Htr5bP31387 370 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Rab10P61027 200 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Pla2g6P97819 807 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Fscn2Q32M02 492 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Tas2r106Q7M724 308 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Hyal5Q812F3 526 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Noc4lQ8BHY2 516 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Cnpy4Q8BQ47 245 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 TdrpQ8C5P7 182 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Trim31Q8R0K2 507 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Map4k3Q99JP0 894 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Aldh1b1Q9CZS1 519 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Fam83dQ9D7I8 585 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Pold3Q9EQ28 462 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Msl3Q9WVG9 525 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Pole2O54956 527 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 TubP50586 505 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 PostnQ62009 838 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Zdhhc19Q810M5 347 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Lpcat2Q8BYI6 544 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Akr1c20Q8VC77 323 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Gm14401A2ARV7 303 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Gm4907B1AXB9 411 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Tmem45a2B7ZWJ5 289 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Dthd1E9PZX1 795 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 2210016F16RikG3X8U3 338 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Cd151O35566 253 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Cbx3P23198 183 aaKnown RBP12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 McuQ3UMR5 350 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Rexo4Q6PAQ4 432 aaKnown RBP12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 HadhaQ8BMS1 763 aaKnown RBP12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 TpbglQ8C013 384 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 NlnQ91YP2 704 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Syt12Q920N7 421 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 NamptQ99KQ4 491 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Pramel1Q99MW3 458 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Fam3aQ9D8T0 230 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Tbc1d21Q9D9D3 336 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Ptk2bQ9QVP9 1009 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Col4a5Q63ZW6 1691 aa12.86□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Zfp985A2A7A5 519 aa12.85□□□□□ -0.35
Clcn3-201ENSMUST00000004430 Fam71e2L7N480 754 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms