RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Cables1Q9ESJ1 568 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tspan3Q9QY33 253 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Il18rapQ9Z2B1 614 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 AccsA2AIG8 502 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm14401A2ARV7 303 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm3752A6NAT4 150 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Trim30bE9PVL6 203 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm4307E9PZY4 289 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Q8BL95 290 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Slc18a2Q8BRU6 517 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 HlfQ8BW74 295 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Bhlhe22Q8C6A8 355 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Saysd1Q8K190 188 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Lrrc4Q99PH1 652 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pou5f2Q9DAC9 329 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Armc8Q9DBR3 673 aa9.25□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 DgkdE9PUQ8 1220 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Vmn2r29L7N2D4 852 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Hipk1O88904 1210 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gon7P0C8B4 98 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Cyp2d9P11714 504 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 PklrP53657 574 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 TsxP70675 144 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Col28a1Q2UY11 1141 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Brms1lQ3U1T3 323 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Spata5Q3UMC0 893 aaKnown RBP9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ugt3a1Q3UP75 523 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 IfneQ80ZF2 192 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Cers6Q8C172 384 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 GldcQ91W43 1025 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pwp1Q99LL5 501 aaKnown RBP9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mmtag2Q99LX5 260 aaKnown RBP9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mrps33Q9D2R8 106 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Slc28a3Q9ERH8 703 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ing1Q9QXV3 279 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm13089A2AGW7 455 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Itga8A2ARA8 1062 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Osbpl8B9EJ86 889 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mkl2P59759 1080 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rab10P61027 200 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Taf13P61216 124 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Irf3P70671 419 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Zfp953Q3UPV7 304 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ugt2a2Q6PDD0 528 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Tmem39bQ810L4 492 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Smim5Q8BT42 78 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 RfkQ8CFV9 155 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mamdc2Q8CG85 686 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gpr1Q8K087 353 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Zfp709Q8VC29 727 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Vps4aQ8VEJ9 437 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Slc35a5Q921R7 437 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ppil2Q9D787 521 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ptdss2Q9Z1X2 473 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Crb1Q8VHS2 1405 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm28363A0A087WQW2 129 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm5145F8VQ88 278 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Il12bP43432 335 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Il18P70380 192 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Serac1Q3U213 654 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Lgr6Q3UVD5 967 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Foxd1Q61345 456 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Itga2Q62469 1178 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Smndc1Q8BGT7 238 aaKnown RBP9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Klhl26Q8BGY4 606 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Slc43a1Q8BSM7 564 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 TbcdQ8BYA0 1196 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rasal3Q8C2K5 1041 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ints5Q8CHT3 1018 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 TrhdeQ8K093 1025 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 MiosQ8VE19 875 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Uxs1Q91XL3 420 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pcdhga10Q91XY9 930 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ssxb1Q9CPU1 170 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Spg21Q9CQC8 308 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Mri1Q9CQT1 369 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ssu72Q9CY97 194 aaKnown RBP9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Prorsd1Q9D820 169 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 IkbkeQ9R0T8 717 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Klhl32A2AJX0 620 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 AaasP58742 546 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gtf2bP62915 316 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Bcl2a1Q07440 172 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Aars2Q14CH7 980 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Shroom1Q5SX79 823 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Ezh2Q61188 746 aaKnown RBP9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Snap91Q61548 901 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 ScaiQ8C8N2 606 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Rpp40Q8R1F9 363 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gstm4Q8R5I6 218 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Lrrc49Q91YK0 686 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Slc44a3Q921V7 656 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Pmf1Q9CPV5 202 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Decr1Q9CQ62 335 aaKnown RBP9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 2610042L04RikQ9D073 150 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Il22bQ9JJY8 179 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Hey2Q9QUS4 339 aa9.24□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Gm20509G3UZF1 325 aa9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 Igf2bp1O88477 577 aaKnown RBP9.23□□□□□ -0.93
Ccdc47-201ENSMUST00000002043 BpgmP15327 259 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms