RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 TEKT4Q8WW24 435 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 HSPH1Q92598 858 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 SKA1Q96BD8 255 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 CELF6Q96J87 481 aaKnown RBP15.28■□□□□ 0.04
PHGDH-231ENST00000641939 SERAC1Q96JX3 654 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 GDAP1L1Q96MZ0 367 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 PACSIN1Q9BY11 444 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 SLC39A8Q9C0K1 460 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 SLC32A1Q9H598 525 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 AASDHPPTQ9NRN7 309 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.28■□□□□ 0.04
PHGDH-231ENST00000641939 CTTNBP2NLQ9P2B4 639 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 UVRAGQ9P2Y5 699 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 SNX11Q9Y5W9 270 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 CHD8Q9HCK8 2581 aa15.28■□□□□ 0.04
PHGDH-231ENST00000641939 CEP295Q9C0D2 2601 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 AKR1B15C9JRZ8 316 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-231ENST00000641939 H3BRJ5 948 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 KRIT1O00522 736 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 GIPC1O14908 333 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 VILLO15195 856 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 POP4O95707 220 aaKnown RBP15.27■□□□□ 0.04
PHGDH-231ENST00000641939 ADRB1P08588 477 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 ZNF883P0CG24 379 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 RARAP10276 462 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 ADRB3P13945 408 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 CD59P13987 128 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 CD38P28907 300 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 MAT2AP31153 395 aaKnown RBP15.27■□□□□ 0.04
PHGDH-231ENST00000641939 ARL4AP40617 200 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 CTSKP43235 329 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 PAPOLAP51003 745 aaKnown RBP15.27■□□□□ 0.04
PHGDH-231ENST00000641939 NEK3P51956 506 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 C21orf59P57076 290 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 RHOAP61586 193 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 RAD51Q06609 339 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 TBX2Q13207 712 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-231ENST00000641939 MYLK3Q32MK0 819 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 SETMARQ53H47 684 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-231ENST00000641939 ATXN7L2Q5T6C5 722 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-231ENST00000641939 AFMIDQ63HM1 303 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 NAPEPLDQ6IQ20 393 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 FBXL19Q6PCT2 694 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 CCDC42Q96M95 316 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 CHP1Q99653 195 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 NHEJ1Q9H9Q4 299 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-231ENST00000641939 IL21RQ9HBE5 538 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 UBA2Q9UBT2 640 aaPredicted RBP15.27■□□□□ 0.04
PHGDH-231ENST00000641939 DMTF1Q9Y222 760 aa15.27■□□□□ 0.04
PHGDH-231ENST00000641939 FNDC3AQ9Y2H6 1198 aaKnown RBP15.27■□□□□ 0.04
PHGDH-231ENST00000641939 ACACBO00763 2458 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 J3KR12 359 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 DFFAO00273 331 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 WNT9AO14904 365 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 PRAMEF11O60813 436 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 RNGTTO60942 597 aaKnown RBP15.26■□□□□ 0.03
PHGDH-231ENST00000641939 PROSCO94903 275 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 PCDH8O95206 1070 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 IGSF6O95976 241 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 WNT1P04628 370 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 GKP32189 559 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 SSR1P43307 286 aaKnown RBP15.26■□□□□ 0.03
PHGDH-231ENST00000641939 CYTH1Q15438 398 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 HADHQ16836 314 aaKnown RBP15.26■□□□□ 0.03
PHGDH-231ENST00000641939 SLC45A4Q5BKX6 768 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 ZNF805Q5CZA5 627 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 N4BP2L1Q5TBK1 243 aaPredicted RBP15.26■□□□□ 0.03
PHGDH-231ENST00000641939 TXNRD3NBQ6F5E7 133 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 POLNQ7Z5Q5 900 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 HORMAD1Q86X24 394 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 ARHGAP12Q8IWW6 846 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 LZTR1Q8N653 840 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 NPWQ8N729 165 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 NETO2Q8NC67 525 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 OSBPL1AQ9BXW6 950 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 PDFQ9HBH1 243 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 TM7SF3Q9NS93 570 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 LCMT1Q9UIC8 334 aa15.26■□□□□ 0.03
PHGDH-231ENST00000641939 A0A1W2PQU0 124 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 A0A1W2PR77 199 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 C16orf96A6NNT2 1141 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 AP1G1O43747 822 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 UGT2B4P06133 528 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 TMEM253P0C7T8 217 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 AMPD1P23109 780 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 KRT81Q14533 505 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 ZNF423Q2M1K9 1284 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 GDPD4Q6W3E5 623 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 PARS2Q7L3T8 475 aaKnown RBP15.25■□□□□ 0.03
PHGDH-231ENST00000641939 RAB7BQ96AH8 199 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 VOPP1Q96AW1 172 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 CSPG4P5Q96PW8 444 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 PCDH18Q9HCL0 1135 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 SPTLC3Q9NUV7 552 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 LHX3Q9UBR4 397 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 MFHAS1Q9Y4C4 1052 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 PCDHGB2Q9Y5G2 931 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 FADS3Q9Y5Q0 445 aa15.25■□□□□ 0.03
PHGDH-231ENST00000641939 TDRD6O60522 2096 aaKnown RBP15.24■□□□□ 0.03
PHGDH-231ENST00000641939 PRAMEF26H0Y7S4 382 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms