RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 CDH19Q9H159 772 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 ARNT2Q9HBZ2 717 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 MID2Q9UJV3 735 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 RUVBL2Q9Y230 463 aaKnown RBP17.28■□□□□ 0.36
PHGDH-211ENST00000641213 SLC27A5Q9Y2P5 690 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 CDY1Q9Y6F8 540 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 FAM95CA0A1B0GW59 222 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 ENPP3O14638 875 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 KLHL2O95198 593 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 RPSAP08865 295 aaKnown RBP17.27■□□□□ 0.36
PHGDH-211ENST00000641213 PAMP19021 973 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 FGFR3P22607 806 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 POLD2P49005 469 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 GATMP50440 423 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 RAP1GDS1P52306 607 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 TAF10Q12962 218 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 NOGQ13253 232 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 THOC5Q13769 683 aaKnown RBP17.27■□□□□ 0.36
PHGDH-211ENST00000641213 SEPT6Q14141 434 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 ACSBG2Q5FVE4 666 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 RASIP1Q5U651 963 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 FBXL22Q6P050 247 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 ZYG11AQ6WRX3 759 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 CEP97Q8IW35 865 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 ABI1Q8IZP0 508 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 CENPLQ8N0S6 344 aaPredicted RBP17.27■□□□□ 0.36
PHGDH-211ENST00000641213 SLC25A41Q8N5S1 370 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 C2CD4AQ8NCU7 369 aaPredicted RBP17.27■□□□□ 0.36
PHGDH-211ENST00000641213 KCTD4Q8WVF5 259 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 TSNARE1Q96NA8 513 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 KLHL5Q96PQ7 755 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 PRKD2Q9BZL6 878 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 UBE2OQ9C0C9 1292 aaKnown RBP17.27■□□□□ 0.36
PHGDH-211ENST00000641213 ATP13A1Q9HD20 1204 aa17.27■□□□□ 0.36
PHGDH-211ENST00000641213 OLA1Q9NTK5 396 aaKnown RBP17.27■□□□□ 0.36
PHGDH-211ENST00000641213 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.27■□□□□ 0.36
PHGDH-211ENST00000641213 RTN3O95197 1032 aaPredicted RBP17.27■□□□□ 0.35
PHGDH-211ENST00000641213 COL6A2P12110 1019 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 MYL4P12829 197 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 HOXD10P28358 340 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 RAB10P61026 200 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 MAXP61244 160 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 C10orf120Q5SQS8 335 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 MARC1Q5VT66 337 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 RAP1GAP2Q684P5 730 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 RAET1EQ8TD07 263 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 CASD1Q96PB1 797 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 C1orf21Q9H246 121 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 CRISPLD1Q9H336 500 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 ELAC1Q9H777 363 aaKnown RBP17.27■□□□□ 0.35
PHGDH-211ENST00000641213 COG4Q9H9E3 785 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 TLR8Q9NR97 1041 aaKnown RBP17.27■□□□□ 0.35
PHGDH-211ENST00000641213 MARCH5Q9NX47 278 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 DONSONQ9NYP3 566 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 MARCH2Q9P0N8 246 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 ACOT9Q9Y305 439 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 PCDHB7Q9Y5E2 793 aa17.27■□□□□ 0.35
PHGDH-211ENST00000641213 MTMR11A4FU01 709 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 ARVCFO00192 962 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 NBNO60934 754 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 VNN2O95498 520 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 MMP2P08253 660 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 CPB1P15086 417 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 SELPP16109 830 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 DNAJB1P25685 340 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 CD86P42081 329 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 GLRBP48167 497 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 PSEN1P49768 467 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 ITKQ08881 620 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 ZNF460Q14592 562 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 ZNF470Q6ECI4 717 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 EPGNQ6UW88 154 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 RSPO2Q6UXX9 243 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-211ENST00000641213 PSMG2Q969U7 264 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 PABPC5Q96DU9 382 aaKnown RBP17.26■□□□□ 0.35
PHGDH-211ENST00000641213 FAM167BQ9BTA0 163 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 SP110Q9HB58 689 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 HCSTQ9UBK5 93 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 ZNF212Q9UDV6 495 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 SCN5AQ14524 2016 aa17.26■□□□□ 0.35
PHGDH-211ENST00000641213 TARM1B6A8C7 271 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 IGLV3-27P01718 113 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 ALDH2P05091 517 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 HMBSP08397 361 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 STMN1P16949 149 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 MAP2K2P36507 400 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 IHHQ14623 411 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 GPNMBQ14956 572 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 DNAL1Q4LDG9 190 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 LIPMQ5VYY2 423 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 RNF19BQ6ZMZ0 732 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 FSTL5Q8N475 847 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-211ENST00000641213 TDRD5Q8NAT2 981 aaKnown RBP17.25■□□□□ 0.35
PHGDH-211ENST00000641213 PXYLP1Q8TE99 480 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 STYXQ8WUJ0 223 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 MOCOSQ96EN8 888 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 SCYL1Q96KG9 808 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 FAM161BQ96MY7 647 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 GPR78Q96P69 363 aa17.25■□□□□ 0.35
PHGDH-211ENST00000641213 VPS45Q9NRW7 570 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms