RNA–Protein interactions for RNA: ENST00000640313.1

VPS35-212, Transcript of VPS35, retromer complex component, humanhuman

TSL 5 BASIC

Gene VPS35, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-212ENST00000640313 EEF1GP26641 437 aaKnown RBP0.53□□□□□ -2.32
VPS35-212ENST00000640313 KLRK1P26718 216 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 SERPINB3P29508 390 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 TYK2P29597 1187 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 CDC25CP30307 473 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 FMO4P31512 558 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 CEACAM8P31997 349 aaPredicted RBP0.53□□□□□ -2.32
VPS35-212ENST00000640313 STAT1P42224 750 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 STT3AP46977 705 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 HSPA7P48741 367 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 CLCN3P51790 818 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 PNLIPRP1P54315 467 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 MLLT10P55197 1068 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 CDH12P55289 794 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 FOXL2P58012 376 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 GNB1P62873 340 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 ADORA2A-AS1P86434 159 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 RUNX1T1Q06455 604 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 GALNT1Q10472 559 aaPredicted RBP0.53□□□□□ -2.32
VPS35-212ENST00000640313 GPS1Q13098 491 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 DHX34Q14147 1143 aaKnown RBP0.53□□□□□ -2.32
VPS35-212ENST00000640313 CTTNQ14247 550 aaKnown RBP0.53□□□□□ -2.32
VPS35-212ENST00000640313 MYBPC2Q14324 1141 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 SAFBQ15424 915 aaKnown RBP eCLIP0.53□□□□□ -2.32
VPS35-212ENST00000640313 RAB30Q15771 203 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 MAPKAPK3Q16644 382 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 LONRF1Q17RB8 773 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 AAK1Q2M2I8 961 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 TCTEX1D4Q5JR98 221 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 FAXCQ5TGI0 409 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 VWA5B1Q5TIE3 1220 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 KHDRBS2Q5VWX1 349 aaKnown RBP0.53□□□□□ -2.32
VPS35-212ENST00000640313 IZUMO3Q5VZ72 239 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 LIN54Q6MZP7 749 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 CCDC144NLQ6NUI1 221 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 HIBCHQ6NVY1 386 aaPredicted RBP0.53□□□□□ -2.32
VPS35-212ENST00000640313 XRRA1Q6P2D8 792 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 NEK10Q6ZWH5 1172 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 TRABD2AQ86V40 505 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 PALB2Q86YC2 1186 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 FMNL3Q8IVF7 1028 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 WDR75Q8IWA0 830 aaKnown RBP0.53□□□□□ -2.32
VPS35-212ENST00000640313 ZDHHC23Q8IYP9 409 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 ADGRF3Q8IZF5 1079 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 SDR16C5Q8N3Y7 309 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 DPP10Q8N608 796 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 METTL27Q8N6F8 245 aaPredicted RBP0.53□□□□□ -2.32
VPS35-212ENST00000640313 LRRC57Q8N9N7 239 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 ATP11CQ8NB49 1132 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 ADPRHL1Q8NDY3 354 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 CMASQ8NFW8 434 aaPredicted RBP0.53□□□□□ -2.32
VPS35-212ENST00000640313 OR1N1Q8NGS0 311 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 RFWD2Q8NHY2 731 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 CEP76Q8TAP6 659 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 STT3BQ8TCJ2 826 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 SLC2A12Q8TD20 617 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 IPO4Q8TEX9 1081 aaKnown RBP0.53□□□□□ -2.32
VPS35-212ENST00000640313 ZNF473Q8WTR7 871 aaKnown RBP0.53□□□□□ -2.32
VPS35-212ENST00000640313 ABHD5Q8WTS1 349 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 SLC22A17Q8WUG5 538 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 BRI3BPQ8WY22 251 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 TMEM190Q8WZ59 177 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 KIAA1191Q96A73 305 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 TTC17Q96AE7 1141 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 SGCZQ96LD1 299 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 RIPOR3Q96MK2 946 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 TBCBQ99426 244 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 NPAS1Q99742 590 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 NUDT22Q9BRQ3 303 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 MECRQ9BV79 373 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 PCDHAC1Q9H158 963 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 NUP62CLQ9H1M0 184 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 EPS8L2Q9H6S3 715 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 ARNT2Q9HBZ2 717 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 PNPLA8Q9NP80 782 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 STARD7Q9NQZ5 370 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 CHST12Q9NRB3 414 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 SLC22A11Q9NSA0 550 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 MTPAPQ9NVV4 582 aaKnown RBP eCLIP0.53□□□□□ -2.32
VPS35-212ENST00000640313 SLC52A1Q9NWF4 448 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 ZDHHC7Q9NXF8 308 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 CHPF2Q9P2E5 772 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 TCEAL9Q9UHQ7 104 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 ITGB1BP2Q9UKP3 347 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 ZMYND8Q9ULU4 1186 aaPredicted RBP0.53□□□□□ -2.32
VPS35-212ENST00000640313 CA14Q9ULX7 337 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 MAN2B2Q9Y2E5 1009 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 ZBTB1Q9Y2K1 713 aa0.53□□□□□ -2.32
VPS35-212ENST00000640313 A0A0A0MQY5 61 aa0.52□□□□□ -2.33
VPS35-212ENST00000640313 TMEM129A0AVI4 362 aa0.52□□□□□ -2.33
VPS35-212ENST00000640313 GOLGA6CA6NDK9 693 aa0.52□□□□□ -2.33
VPS35-212ENST00000640313 GOLGA6BA6NDN3 693 aa0.52□□□□□ -2.33
VPS35-212ENST00000640313 FAM90A20PA6NIJ5 464 aa0.52□□□□□ -2.33
VPS35-212ENST00000640313 SLC38A8A6NNN8 435 aa0.52□□□□□ -2.33
VPS35-212ENST00000640313 KIF28PB7ZC32 967 aa0.52□□□□□ -2.33
VPS35-212ENST00000640313 BLOC1S5-TXNDC5H3BN57 136 aa0.52□□□□□ -2.33
VPS35-212ENST00000640313 HSPB6O14558 160 aa0.52□□□□□ -2.33
VPS35-212ENST00000640313 PIP5K1BO14986 540 aa0.52□□□□□ -2.33
VPS35-212ENST00000640313 KIF3BO15066 747 aa0.52□□□□□ -2.33
VPS35-212ENST00000640313 NPC1O15118 1278 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms