RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 COG7P83436 770 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 TXNL4AP83876 142 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 ADRM1Q16186 407 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 DALRD3Q5D0E6 543 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 ZNF280DQ6N043 979 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 RPS27LQ71UM5 84 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 CTU1Q7Z7A3 348 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 OSTM1Q86WC4 334 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 PELI3Q8N2H9 469 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 TXNDC5Q8NBS9 432 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 USP33Q8TEY7 942 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 SLCO4A1Q96BD0 722 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 GPR78Q96P69 363 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 CIB1Q99828 191 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 TMEM79Q9BSE2 394 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 FTHL17Q9BXU8 183 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 OSBPL2Q9H1P3 480 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 POMKQ9H5K3 350 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 TRPC7Q9HCX4 862 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 KLK14Q9P0G3 267 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 SUCOQ9UBS9 1254 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 RSL24D1Q9UHA3 163 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 NUP205Q92621 2012 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 FAM95CA0A1B0GW59 222 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 PLOD2O00469 737 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 FBP2O00757 339 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 NRP1O14786 923 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 RECQL4O94761 1208 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 JCHAINP01591 159 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 ADARP55265 1226 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 CDH17Q12864 832 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 DCTN2Q13561 401 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 REP15Q6BDI9 236 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 PDZD4Q76G19 769 aaPredicted RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 OTOP3Q7RTS5 596 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 CARM1Q86X55 608 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 HERC6Q8IVU3 1022 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 ALDH16A1Q8IZ83 802 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 STON2Q8WXE9 905 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 ITFG2Q969R8 447 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 HAUS8Q9BT25 410 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 DNAI2Q9GZS0 605 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 LRRC4Q9HBW1 653 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 WDR6Q9NNW5 1121 aaKnown RBP11.05□□□□□ -0.64
SNIP1-204ENST00000638725 TNFRSF12AQ9NP84 129 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 THEGQ9P2T0 379 aa11.05□□□□□ -0.64
SNIP1-204ENST00000638725 SBF1O95248 1867 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 PRORSD1PA6NEY8 169 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 TRPC5OSA6NMA1 111 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 H6PDO95479 791 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 SLC25A27O95847 323 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 FYNP06241 537 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 CYP2C9P11712 490 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 NDST2P52849 883 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 RAB10P61026 200 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 RHDQ02161 417 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 SEMA3BQ13214 749 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 PPP1R3AQ16821 1122 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 ITPRIPL1Q6GPH6 555 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 KRT80Q6KB66 452 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 HMBOX1Q6NT76 420 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 LAYNQ6UX15 382 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 SIX6OS1Q8N1H7 587 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 B3GALNT2Q8NCR0 500 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 APPL2Q8NEU8 664 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 ABTB1Q969K4 478 aaPredicted RBP11.04□□□□□ -0.64
SNIP1-204ENST00000638725 HDAC11Q96DB2 347 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 CELF6Q96J87 481 aaKnown RBP11.04□□□□□ -0.64
SNIP1-204ENST00000638725 SLC2A13Q96QE2 648 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 KIFC1Q9BW19 673 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 OSBPL11Q9BXB4 747 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 DUSP16Q9BY84 665 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 UNC93B1Q9H1C4 597 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 CACNA2D2Q9NY47 1150 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 UTP6Q9NYH9 597 aaKnown RBP11.04□□□□□ -0.64
SNIP1-204ENST00000638725 CCDC167Q9P0B6 97 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 CIDEBQ9UHD4 219 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 TLL2Q9Y6L7 1015 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 HEATR9A2RTY3 570 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 PIRO00625 290 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 TRIM24O15164 1050 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 STMN1P16949 149 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 ALDH3B2P48448 385 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 CDH15P55291 814 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 SULT2A1Q06520 285 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 LRP8Q14114 963 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 POU6F1Q14863 301 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 AGKQ53H12 422 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 NAPEPLDQ6IQ20 393 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 SLC27A1Q6PCB7 646 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 MAMDC4Q6UXC1 1216 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 TRIM67Q6ZTA4 783 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 LPCAT2Q7L5N7 544 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 CATSPER4Q7RTX7 472 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 SPATA22Q8NHS9 363 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 SPPL2BQ8TCT7 592 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 TEKT5Q96M29 485 aa11.04□□□□□ -0.64
SNIP1-204ENST00000638725 MRPL46Q9H2W6 279 aaKnown RBP11.04□□□□□ -0.64
SNIP1-204ENST00000638725 CYP4F12Q9HCS2 524 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms