RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 SLC16A12Q6ZSM3 486 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 SCML4Q8N228 414 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 AFAP1L2Q8N4X5 818 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 ZSWIM2Q8NEG5 633 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 BEST2Q8NFU1 509 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 OR6Q1Q8NGQ2 317 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 OR2T34Q8NGX1 318 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 OR2T3Q8NH03 318 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 ZFP90Q8TF47 636 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 GIPC2Q8TF65 315 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 ISL2Q96A47 359 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 MCEEQ96PE7 176 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 LHPPQ9H008 270 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 MUC3BQ9H195 1237 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 SLA2Q9H6Q3 261 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 RSAD1Q9HA92 442 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 GMIPQ9P107 970 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 PI4KBQ9UBF8 816 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 MID2Q9UJV3 735 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 ZNF229Q9UJW7 825 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 TBX20Q9UMR3 447 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 VWA7Q9Y334 891 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 RAP2CQ9Y3L5 183 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 AQP12BA6NM10 295 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 HAT1O14929 419 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 CHMP2AO43633 222 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 CD1EP15812 388 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 NAGAP17050 411 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 CDH5P33151 784 aaPredicted RBP12.15□□□□□ -0.46
CAPN3-221ENST00000638141 GRK3P35626 688 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 PLA2G16P53816 162 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 PPP2R2BQ00005 443 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 FCHO2Q0JRZ9 810 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 TFDP2Q14188 446 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 CDK10Q15131 360 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 MAPRE2Q15555 327 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 SAMD4BQ5PRF9 694 aaKnown RBP12.15□□□□□ -0.46
CAPN3-221ENST00000638141 LMBRD2Q68DH5 695 aaPredicted RBP12.15□□□□□ -0.46
CAPN3-221ENST00000638141 ZBTB46Q86UZ6 589 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 AQP12AQ8IXF9 295 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 RAVER1Q8IY67 606 aaKnown RBP12.15□□□□□ -0.46
CAPN3-221ENST00000638141 GPD1LQ8N335 351 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 CYP2W1Q8TAV3 490 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 DEPDC1BQ8WUY9 529 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 PPWD1Q96BP3 646 aaKnown RBP12.15□□□□□ -0.46
CAPN3-221ENST00000638141 EBNA1BP2Q99848 306 aaKnown RBP12.15□□□□□ -0.46
CAPN3-221ENST00000638141 ILKAPQ9H0C8 392 aaPredicted RBP12.15□□□□□ -0.46
CAPN3-221ENST00000638141 NOL6Q9H6R4 1146 aaKnown RBP12.15□□□□□ -0.46
CAPN3-221ENST00000638141 ADA2Q9NZK5 511 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 MAU2Q9Y6X3 613 aa12.15□□□□□ -0.46
CAPN3-221ENST00000638141 SAGE2PA6NJ88 616 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 KPNA7A9QM74 516 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 TPP1O14773 563 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 KRT8P05787 483 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 FCGR1AP12314 374 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 BMP4P12644 408 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 IL1R1P14778 569 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 TPSB2P20231 275 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 MAGEA12P43365 314 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 PTPN9P43378 593 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 ADARB1P78563 741 aaKnown RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 TPSAB1Q15661 275 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 HIST2H2ACQ16777 129 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 ZNF181Q2M3W8 571 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 ZACNQ401N2 412 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 CYBRD1Q53TN4 286 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 RBM48Q5RL73 367 aaKnown RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 LDLRAP1Q5SW96 308 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 SEL1L3Q68CR1 1132 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 ERAP2Q6P179 960 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 TUBA3EQ6PEY2 450 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 DARS2Q6PI48 645 aaKnown RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 CRTC3Q6UUV7 619 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 RALGPS2Q86X27 583 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 CCDC28AQ8IWP9 274 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 HACE1Q8IYU2 909 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 NATD1Q8N6N6 113 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 OSCP1Q8WVF1 389 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 CENPNQ96H22 339 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 GMCL1Q96IK5 515 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 B3GNT4Q9C0J1 378 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 SDCBP2Q9H190 292 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 VPS33BQ9H267 617 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 RNPEPQ9H4A4 650 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 RPAP3Q9H6T3 665 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 SMPD3Q9NY59 655 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 SLC9A2Q9UBY0 812 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 PCDHB4Q9Y5E5 795 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 POLR1CO15160 346 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 MAN1A2O60476 641 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 TIPRLO75663 272 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 SEC24DO94855 1032 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 CHRNA5P30532 468 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 EIF2DP41214 584 aaKnown RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 ZNF132P52740 706 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 NKX2-5P52952 324 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 ATXN3P54252 364 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-221ENST00000638141 GABARAPL2P60520 117 aa12.14□□□□□ -0.47
CAPN3-221ENST00000638141 OGDHQ02218 1023 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms